Rhizorhabdus wittichii DC-6: HY78_10845
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Entry
HY78_10845 CDS
T05200
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00300
Lysine biosynthesis
sphd00470
D-Amino acid metabolism
sphd01100
Metabolic pathways
sphd01110
Biosynthesis of secondary metabolites
sphd01120
Microbial metabolism in diverse environments
sphd01230
Biosynthesis of amino acids
Module
sphd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HY78_10845
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HY78_10845
Enzymes [BR:
sphd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HY78_10845
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ARR53886
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All DBs
Position
complement(2251180..2252004)
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AA seq
274 aa
AA seq
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MQVRFHKMHGLGNDFVVIDARATAPVEMTAARARALADRKTGVGCDQLILLEPSAVADAR
MRIFNADGSEVEACGNATRCVVSLLGGSARIETVAGLLEGRSADGQVSVELGEPRFDWDA
IPLAYAMDTRAMPVAWEELEAPMAANVGNPHVVFFVPETDAVALDRLGPRIETDPLFPAR
INVNVATVDDRANIRLRVWERGVGLTDACGTGACATAVSAIRAGLVDSPVRVTLPGGPLT
IDWAPGRPIVMTGPATHVFTAETDLSAFGADSRG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccgctttcacaagatgcacggtctcggcaatgatttcgtcgtgatcgatgcg
cgcgccaccgcgccggtcgagatgacggcggcgcgcgcgcgggcgctcgccgaccgcaag
accggggtgggctgcgaccagctcatcctgctcgaaccgtccgccgtcgccgacgcgcgg
atgcggatcttcaacgccgacggcagcgaggtcgaggcgtgcggcaacgccacacgctgc
gtcgtcagcctgctcggcggcagcgcgcggatcgagacggtcgccgggctgctcgaaggc
cgcagcgccgacgggcaggtgtcggtcgagctcggcgagccgcgcttcgactgggacgcg
atcccgctcgcctatgcgatggacacccgcgcgatgccggtcgcctgggaggagctcgag
gcgccgatggccgccaatgtcggcaatccgcacgtcgtcttcttcgtgcccgagaccgac
gcggtcgcgctcgaccggctcgggccgcggatcgagaccgatccgctgttccccgcgcgg
atcaacgtcaacgtcgcgacggtcgacgaccgggcgaacatccgcctgcgcgtgtgggag
cgcggcgtcggcctgaccgacgcctgcggcaccggcgcctgcgcgacggcggtgtcggcg
atccgcgccgggctggtcgactcgccggtgcgggtgacgctgcccggcgggccgctgacg
atcgactgggcgcccggccggcccatcgtcatgaccggccccgccacccatgtcttcacc
gccgagaccgacctgagcgccttcggggccgacagccgcggatga
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