KEGG   Rhizorhabdus wittichii DC-6: HY78_10845
Entry
HY78_10845        CDS       T05200                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd00300  Lysine biosynthesis
sphd00470  D-Amino acid metabolism
sphd01100  Metabolic pathways
sphd01110  Biosynthesis of secondary metabolites
sphd01120  Microbial metabolism in diverse environments
sphd01230  Biosynthesis of amino acids
Module
sphd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HY78_10845
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HY78_10845
Enzymes [BR:sphd01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HY78_10845
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ARR53886
LinkDB
Position
complement(2251180..2252004)
AA seq 274 aa
MQVRFHKMHGLGNDFVVIDARATAPVEMTAARARALADRKTGVGCDQLILLEPSAVADAR
MRIFNADGSEVEACGNATRCVVSLLGGSARIETVAGLLEGRSADGQVSVELGEPRFDWDA
IPLAYAMDTRAMPVAWEELEAPMAANVGNPHVVFFVPETDAVALDRLGPRIETDPLFPAR
INVNVATVDDRANIRLRVWERGVGLTDACGTGACATAVSAIRAGLVDSPVRVTLPGGPLT
IDWAPGRPIVMTGPATHVFTAETDLSAFGADSRG
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcaggtccgctttcacaagatgcacggtctcggcaatgatttcgtcgtgatcgatgcg
cgcgccaccgcgccggtcgagatgacggcggcgcgcgcgcgggcgctcgccgaccgcaag
accggggtgggctgcgaccagctcatcctgctcgaaccgtccgccgtcgccgacgcgcgg
atgcggatcttcaacgccgacggcagcgaggtcgaggcgtgcggcaacgccacacgctgc
gtcgtcagcctgctcggcggcagcgcgcggatcgagacggtcgccgggctgctcgaaggc
cgcagcgccgacgggcaggtgtcggtcgagctcggcgagccgcgcttcgactgggacgcg
atcccgctcgcctatgcgatggacacccgcgcgatgccggtcgcctgggaggagctcgag
gcgccgatggccgccaatgtcggcaatccgcacgtcgtcttcttcgtgcccgagaccgac
gcggtcgcgctcgaccggctcgggccgcggatcgagaccgatccgctgttccccgcgcgg
atcaacgtcaacgtcgcgacggtcgacgaccgggcgaacatccgcctgcgcgtgtgggag
cgcggcgtcggcctgaccgacgcctgcggcaccggcgcctgcgcgacggcggtgtcggcg
atccgcgccgggctggtcgactcgccggtgcgggtgacgctgcccggcgggccgctgacg
atcgactgggcgcccggccggcccatcgtcatgaccggccccgccacccatgtcttcacc
gccgagaccgacctgagcgccttcggggccgacagccgcggatga

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