KEGG   Rhizorhabdus wittichii DC-6: HY78_11185
Entry
HY78_11185        CDS       T05200                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd00300  Lysine biosynthesis
sphd00470  D-Amino acid metabolism
sphd01100  Metabolic pathways
sphd01110  Biosynthesis of secondary metabolites
sphd01120  Microbial metabolism in diverse environments
sphd01230  Biosynthesis of amino acids
Module
sphd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HY78_11185
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HY78_11185
Enzymes [BR:sphd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HY78_11185
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ARR53950
LinkDB
Position
2323877..2325148
AA seq 423 aa
MDHFNLKDGVLHAEDVALPAIAEAVGTPVYVYSTATIERHVAVFKAALAAVESGPEGPLI
AFAVKANPNRAVLATLARAGLGADVVSGGELLRARAAGIPADKIVFSGVGKTEAEMRLGL
EQGIFQFNIESEPEAEMLSEVAAATGRRAPVAFRINPNVIAGTHAKISTGGSEDKFGVAY
DRAIAAYARAAELPGLDVRGVAVHIGSQLTDLGPSRAAFEKIGALIAELRAAGHRIVTAD
LGGGLGVPYDPAKPVPPLPDAYGAMVREVTAGWDTRLVFEPGRVIVGNAGVLLSRVIRVK
PGVTDPFVIVDAAMNDLMRPSLYDAWHDIRAVTPNGAAMTANIVGPICESGDSFAKKRAM
DAVGPGDLVTFMTAGAYGATMANTYNSRALTPEVLVNGDQWAVVRERQPIEALIAADKLP
PWV
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggaccatttcaacctgaaggacggcgtcctccacgccgaggacgtggcgctgcccgcg
atcgccgaggcggtggggacgccggtctatgtctattcgaccgcgacgatcgagcggcat
gtcgcggtgttcaaggccgcgctcgccgccgtcgaatcggggcccgaggggccgctgatc
gccttcgcggtgaaggccaatcccaaccgcgcggtgctggcgacgctcgccagggccggg
ctcggcgccgacgtggtgtcgggcggcgagctgctgcgcgcgcgcgccgccggcatcccc
gccgacaagatcgtcttctcgggcgtcggcaagaccgaggcggagatgcggctcggcctc
gaacagggcatcttccagttcaacatcgaatccgagcccgaggccgagatgctctccgag
gtcgcggcggcgacgggccggcgcgcgccggtcgccttccgcatcaacccgaacgtgatc
gcgggcacccacgccaagatctcgaccggcgggtcggaggacaaattcggcgtcgcctat
gaccgcgcgatcgccgcctatgcgcgcgcggccgagttgcccgggctcgacgtccgcggc
gtcgcggtccacatcggcagccagctcaccgacctcggcccgtcgcgcgccgccttcgag
aagatcggcgcgcttatcgccgaactgcgcgccgccgggcaccgcatcgtcaccgccgat
ctgggcggcggcctcggcgtcccctacgacccggccaagccggtgccgccgctgcccgac
gcctatggcgcgatggtgcgcgaggtgacggcgggctgggacacgcggctggtcttcgag
cccggccgggtgatcgtcggcaatgccggggtgctgctgtcgcgggtgatccgggtcaag
cccggcgtcaccgatccgttcgtcatcgtcgacgcggcgatgaacgacctgatgcggccc
agcctctacgacgcctggcacgatatccgcgcggttacgccgaacggtgcggcaatgacg
gccaacatcgtcggccccatctgtgaaagcggcgacagtttcgccaagaagcgggcgatg
gacgccgtcggtcccggcgacctcgtcaccttcatgacggcgggagcctatggggcgacg
atggccaacacctataactcgcgcgcgctgacgcccgaggtgctggtgaacggggaccaa
tgggcggtcgtccgggagaggcagccgatcgaggcgctgatcgcggcggacaagctcccg
ccgtgggtgtga

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