Rhizorhabdus wittichii DC-6: HY78_11855
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Entry
HY78_11855 CDS
T05200
Name
(GenBank) aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00020
Citrate cycle (TCA cycle)
sphd00630
Glyoxylate and dicarboxylate metabolism
sphd00640
Propanoate metabolism
sphd00720
Other carbon fixation pathways
sphd01100
Metabolic pathways
sphd01120
Microbial metabolism in diverse environments
sphd01200
Carbon metabolism
sphd01210
2-Oxocarboxylic acid metabolism
sphd01230
Biosynthesis of amino acids
Module
sphd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sphd_M00012
Glyoxylate cycle
sphd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HY78_11855
00630 Glyoxylate and dicarboxylate metabolism
HY78_11855
00640 Propanoate metabolism
HY78_11855
09102 Energy metabolism
00720 Other carbon fixation pathways
HY78_11855
Enzymes [BR:
sphd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
HY78_11855
4.2.1.99 2-methylisocitrate dehydratase
HY78_11855
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
ARR54079
LinkDB
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Position
complement(2453956..2456640)
Genome browser
AA seq
894 aa
AA seq
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MTAVGQDTLKTRSTLNVDGKHYAYYSLAKAAGQLGDISRLPFSMKVLLENLLRFEDGTTV
TTEDVQAIVDWQKERTSEREIQYRPARVLMQDFTGVPCVVDLAAMRDAMNTLGGDAQKIN
PLVPVHLVIDHSVMVDSFGSPKAFDENVALEYARNGERYEFLRWGSKALNNFKVVPPGTG
ICHQVNLENLAQAVWSSADGSGVEVAYPDTCVGTDSHTTMINGLGVLGWGVGGIEAEAAM
LGQPVSMLIPEVVGFKLSGTLTEGITATDLVLTVTQMLRAKGVVGRFVEFYGPGLDALSL
ADRATIANMAPEYGATCGFFPIDDATLVYMRLTGRSAETVALVEAYAKEQGFWRDATAAD
PVFTDTLHLDMSTVQPSLAGPKRPQDRVLLASVDEGFNSELATGYKKGDEADKRVAVEGT
GFDIGHGDVVIAAITSCTNTSNPSVLVAAGLVARKANALGLKAKPWVKTSLAPGSQVVTD
YLEKAGLQKDLDSIGFNLVGYGCTTCIGNSGPLPDPISKAINGNDLVASAVLSGNRNFEG
RVSPDVRANYLASPPLVVAYALFGTTAKDITQEPIGTSSDDKPVYLKDIWPTTAEVANTV
AAAIDSEMFSSRYANVFQGDKNWQAIDVEGSDTYAWRAGSTYVANPPYFEGMSMTPAPVR
DIVEARPLAIFADSITTDHISPAGSIKVDSPAGRYLTEHQVTKADFNSYGARRGNHEVMM
RGTFANIRIKNQMIPGIEGGLTKHIPSGEVMAIYDAAMKYKAEGTPLVVVAGKEYGTGSS
RDWAAKGTNLLGVRAVIAESFERIHRSNLVGMGVLPLQFAEGIDRNTLKLDGTETFSIDD
VAGLRPRQAVSVKLTRADGSTESFETRCRIDTVNELEYFLNGGILQYVLRKLAA
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgtcggtcaggacactctcaagactcgttccaccctcaacgtcgacggcaag
cattatgcctattattcgctcgccaaggcggccgggcagctcggcgacatctcccgcctg
cccttctcgatgaaggtgctgctggagaacctgctccgcttcgaggacggcaccaccgtc
accaccgaggacgtccaggcgatcgtcgactggcagaaggagcgcacgtccgagcgggag
atccagtatcgcccggcccgcgtgctgatgcaggacttcaccggcgttccctgcgtcgtc
gacctggcggcgatgcgcgacgcgatgaacacgctcggcggcgacgcgcagaagatcaac
ccgctcgtccccgtccacctggtcatcgaccattcggtgatggtcgacagcttcggcagc
cccaaggcgttcgacgagaatgtcgcgctcgaatatgcccgcaacggcgagcgctacgaa
ttcctccgctgggggtcgaaggcgctcaacaacttcaaggtcgtccccccgggcaccggc
atctgccaccaggtcaacctcgagaatctcgcccaggcggtgtggagctcggccgacggc
tcgggcgtcgaggtcgcctatcccgacacctgcgtcggcaccgacagccacaccacgatg
atcaacggcctgggcgtgctcggctggggcgtcggcggcatcgaggccgaggcggcgatg
ctcggccagccggtgtcgatgctgatccccgaggtggtcggcttcaagctgtcgggcacc
ctcaccgagggcatcaccgcgaccgacctggtgctgaccgtcacccagatgctgcgcgcc
aagggcgtggtcggccgcttcgtcgaattctacggccccggcctcgacgcgctgtcgctc
gccgaccgcgcgaccatcgccaacatggcgcccgaatatggcgcgacctgcggcttcttc
ccgatcgacgacgcgaccctcgtctacatgcgcctcaccggccgctcggccgagaccgtc
gcgttggtcgaggcctatgccaaggaacagggcttctggcgcgacgcgaccgccgccgat
ccggtgttcaccgacacgctgcacctcgacatgtcgaccgtccagccgtcgctcgccggc
ccgaagcgcccgcaggaccgcgtcctgctcgcctcggtcgacgaaggcttcaacagcgag
ctggcgaccggctacaagaagggcgacgaagccgacaagcgcgtcgccgtcgagggcacc
ggcttcgacatcggccatggcgacgtcgtgatcgccgcgatcaccagctgcaccaacacc
tccaatccgtcggtgctggtcgccgccggcctggtcgcccgcaaggcgaacgcgctcggc
ctcaaggcgaagccctgggtcaagacctcgctcgccccggggtcgcaggtcgtcaccgac
tatctcgaaaaggccgggctccagaaggacctcgactcgatcggcttcaacctggtcggc
tatggctgcaccacctgcatcggcaattcgggcccgctgcccgatccgatctcgaaggcg
atcaacggcaacgacctcgtcgcctcggccgtcctctccggcaaccgcaacttcgagggc
cgcgtctcgcccgacgtccgcgccaactatctggcgtcgccgccgctggtcgtcgcctat
gcgctgttcggcaccaccgccaaggacatcacgcaggagccgatcggcacctcgtccgac
gacaagccggtctatctgaaggacatctggccgaccacggcggaggtcgccaacaccgtc
gccgccgcgatcgacagcgagatgttctccagccgctacgccaacgtcttccagggcgac
aagaactggcaggcgatcgacgtcgaggggtcggacacctacgcctggcgcgcgggttcg
acctatgtcgccaacccgccctatttcgagggcatgtcgatgaccccggccccggtgcgg
gacatcgtcgaggcgcgtccgctcgccatcttcgccgactcgatcaccaccgaccacatc
agcccggccggatcgatcaaggtcgacagcccggcgggccgctacctgaccgagcaccag
gtcaccaaggccgacttcaacagctacggcgcgcgccgcggcaaccatgaggtcatgatg
cgcggcaccttcgccaatatccgcatcaagaaccagatgattcccggcatcgagggcggc
ctgaccaagcacatcccctcgggcgaggtgatggcgatctacgacgcggcgatgaagtac
aaggccgagggcaccccgctggtcgtcgtcgcgggcaaggaatatggcaccggatcgtcg
cgcgactgggctgcgaagggcaccaacctgctcggcgtccgcgccgtcatcgccgagagc
ttcgagcgcatccaccgctcgaacctggtcggcatgggcgtgctgccgctgcagttcgcg
gaagggatcgaccgcaacacgctcaagctcgacggcaccgagaccttctcgatcgacgat
gtcgccggcctgcgcccgcgccaggccgtcagcgtcaagctcacccgcgccgacggctcg
accgagagcttcgagacccgctgccggatcgataccgtcaacgagctcgaatatttcctc
aacggcggcatcctccagtacgtgctgcgcaagctggcggcgtaa
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