Rhizorhabdus wittichii DC-6: HY78_12920
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Entry
HY78_12920 CDS
T05200
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K03556
LuxR family transcriptional regulator, maltose regulon positive regulatory protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphd03000
]
HY78_12920
Transcription factors [BR:
sphd03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
HY78_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
TPR_MalT
Sigma70_r4_2
Sigma70_r4
HTH_23
AAA_30
HTH_28
AAA_16
AAA_25
AAA_22
AAA_33
HTH_29
TPR_19
NACHT
AAA_11
HTH_24
Sigma70_ECF
HTH_Tnp_1
DUF6362
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ARR54264
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Position
2664891..2667530
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AA seq
879 aa
AA seq
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MRYCPPRLIEPLVARPRIARRMAEAAGKVTLVVGPPGSGKTSALASHHADLAAGGAAVRW
LTLSAEDNDPAILRRHLDHAFRGAGAEGREESEGLSDPPEDIVGFIDGLEKIDAAPARAL
IGAFVLELPPSSSFHITARRMQGPMFHDGWLRGVVEVIGPDELRMTDDEAAALLGEAWSP
WDRQRINEAVDGWAAGLRFVARAPRSAERLLDGTGERPFPVEMANYLDDVVCARMDAASL
AALMDVSVLDRFTPEALAAMPGRPCDWAQIDDHIREGSFIRYVDEQRCWAAFHPVFGRHL
RQRLRRFDPDRFDALNRFAASWFEANGFGAEAIRHAVTVADSAFAARVIENVGAIHVDLC
DGPDVGLGERVPATRAGELPLLFLGQIYFAIRRGRSVEARAALEEAGRQTRGFTLLDRGA
DPESIRGFAQLIDMVLDASDDRPITEQRLAELERAMEAHRGVRPILASGVACMLALAYLE
LSRYAEAATVCGIGLHAMHDVKDSRVSVFLRIHQADIAVARDTVDKAVLYIEDAQRIARI
GSGVDNYEVIATRILRAGLHYENNELDAALALLDPSLRQLGSINAWVRLCASGFGTAAAI
AGIRHGIDAAEERLRAGEALARERNLPRLLQFMAIARLRELTRAGEWRAAMEHVESPGFA
GLLATDSLSHAVLGVQVPAMLEVARLMIELGRPHDAQAWLDRINKPFLGEADSRFRFTFR
IMAMRAAYGMRRYNAAVDHMQAAVELASHAGLVRRALNNRQHLTEVFDWSIRNGRHLPAR
IGAYVDDVLRGADGTESGATLQQSSPRRGVEQAPNNFTLSPRETEIIALVAEGYITKEIA
VRLGISEGTVKTHRKKIHEKLGVASRSQAIARARDLLII
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcgctattgtccgccccggctgatcgaaccgctggtcgcgcgcccgcgtatcgcccgg
cggatggcggaggcggccggcaaggtgacgctggtcgtcggcccgccgggcagcggcaag
acctcggcgctcgccagccaccacgccgatctcgccgccggcggcgcggcggtgcgctgg
ctgacgctgtcggccgaggacaatgaccccgccatcctgcgccgccatctcgaccacgcc
ttccggggcgcgggcgcggaggggcgcgaggagagcgaaggcctgtccgatccgcccgag
gatatcgtcggcttcatcgacgggctggagaagatcgacgccgccccggcccgcgccctg
atcggcgccttcgtcctcgaactgccgccgagcagcagcttccacatcaccgcgcgccgg
atgcagggcccgatgttccacgacggttggctgcgcggcgtcgtcgaggtcatcggcccc
gacgagctgcgcatgaccgacgacgaggcggcggcgctgctcggcgaggcgtggagcccc
tgggatcgccagcggatcaacgaggcggtcgatggctgggccgccgggctgcgcttcgtc
gcccgcgccccccgcagcgcggagcggttgctggacggcacgggggagcggccctttccg
gtcgagatggccaattatctcgacgacgtcgtctgcgcgcggatggacgccgcctcgctc
gccgcgttgatggacgtcagcgtgctcgaccgcttcacccccgaggcgctggcggcgatg
cccggccggccctgcgactgggcgcagatcgacgaccatatccgcgagggatcgttcatc
cgctatgtcgacgagcagcgctgctgggcggcgttccacccggtgttcggccggcacctg
cgccagcggctgcggcgcttcgatcccgaccggttcgacgcgctcaaccgcttcgccgcc
tcctggttcgaggcgaacggcttcggcgccgaggcgatccgccacgccgtcaccgtcgcc
gactccgccttcgccgcgcgcgtcatcgagaatgtcggcgcgatccatgtcgacctgtgc
gacggccccgatgtcggcctgggcgagcgcgtccccgcgacgcgggcgggcgagctgccg
ctgctgttcctggggcagatctatttcgcgatccggcgtgggcgatcggtcgaggcgcgc
gccgcgctggaggaggcggggcggcagacgcgcggcttcaccctgctcgatcgcggcgcc
gatcccgaatcgatccgcggcttcgcccagctcatcgatatggtgctcgacgcctccgac
gaccggccgatcaccgagcagcggctcgccgagctagaacgggcgatggaggcgcatcgc
ggggtgcggccgatcctggcgagcggcgtcgcctgcatgctggcgctcgcctatctcgaa
ctgtcccgctacgccgaggcggcgacggtgtgcgggatcggcctgcacgcgatgcacgac
gtcaaggacagccgggtctcggtgttcctgcgcatccaccaggccgacatcgcggtggcg
cgcgacacggtcgacaaggcggtgctctacatcgaggacgcccagcgcatcgcccggatc
ggcagcggcgtcgacaattacgaggtgatcgccacccgcatcctgcgcgccggcctccat
tatgagaataacgagctcgacgccgcgctggcgctgctcgaccccagcctccgccagctc
ggctcgatcaacgcctgggtgcggctgtgcgcgtcgggcttcggcaccgccgcggcgatc
gccggcatccgccacggcatcgacgcggccgaggaacggctccgcgccggcgaggcgctg
gcgcgcgagcgcaacctgccgcgcctgctccagttcatggcgatcgcgcggctgcgcgag
ctgacccgcgcgggcgaatggcgggcggcgatggagcatgtcgagagccccggcttcgcc
gggctgctcgcgaccgacagcctgtcgcacgcggtgctcggcgtgcaggtgccggcgatg
ctcgaagtcgcccggctgatgatcgagctcggccggccgcacgacgcgcaggcctggctc
gaccggatcaacaagcccttcctcggcgaggccgacagccgcttccgcttcaccttccgg
atcatggcgatgcgcgcggcctacgggatgcggcgctacaatgccgcggtcgaccatatg
caggcggcggtcgagctggcgagccatgccgggctggtgcggcgcgcgctcaacaatcgc
cagcacctgaccgaagtgttcgactggtcgatccgcaacggccgccacctgcccgcgcgg
atcggcgcctatgtcgacgacgtgctgcgcggcgccgacggcaccgagagcggcgcgacg
ctgcagcagagcagcccgcgccgcggcgtcgagcaggcgcccaacaatttcacgctcagc
ccgcgcgagaccgagatcatcgcgctggtcgccgaaggctatatcaccaaggagatcgcg
gtccgcctcggcatctccgaggggacggtgaagacccaccgcaagaagatccacgagaag
ctgggcgtcgccagccggtcgcaggcgatcgcgcgggcgcgcgacctgctgatcatctga
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