Rhizorhabdus wittichii DC-6: HY78_13180
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Entry
HY78_13180 CDS
T05200
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_13180
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_13180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARR54312
LinkDB
All DBs
Position
2725850..2728048
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AA seq
732 aa
AA seq
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MKLSNSAAKGGAIETTRAHFSAHGAMMALAVASVGFWNAAAHAQVDMAAQAEAAGADEIV
VTARKRQEASQNVPLSVAAFNGEMLQSRSVTTVSDIQGLVPGLHYQERGNLQTELTIRGV
GGDARNPGIDAGVGMYIDGAYIPRTSGYNADLSDIAQVEVLRGPQGTLFGKNTIGGVINI
VTKKPTEELTGFVYGSYGNYDAVRTQAAISGGLAPALSAKVTVASWNRQGYIRNRVRNER
LNNEDRLGGRLQLRYNPGTQLDVNFSVDGTRDRRRGVLNQIGSPAGAAAPYFTGNRFVMD
ADQRNSDARDMWGMTLGIDYVLANDMTITSVTAYRDIDILVYSDIDQTPLDLFHSGPFTD
DTTMISQELRLVSPGNKPFRYVLGLFGYKQDIDSDRDIFINGARSIVLDTAANTDSYAAF
GNFDYDLTSQLTATVGLRYSIDKKDGKFNQQRTGLDYAIPLKRTDKNLSWTGSLLYKITP
RLSTYATVSRGFKAGGFNLDTAGAVGLTASDLNFLPERVTNYEVGLKGRATDWMRFSLAV
FQMDYKNKQVSQFVNPPVGNVPVVLVTNAGQARIKGVEFDTTLTPVHGLSLSGNVSYLDA
KYRSFPNAAVVGGVLVSYTGNRVERTPKWTAGGSIDYRHPIGSGDLVMGANVSYNGAVDL
QPDNLPRNYEGSYTLVDARFGYEMADGKWGLYLWGKNLTKENFATFKRQFAGLDQVAYGA
PRTYGVEARFKF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagcaactctgccgcaaagggcggcgccattgaaactacgcgtgcgcatttc
tctgcccacggcgcgatgatggcgctggccgtcgcgagcgtgggtttctggaacgcggcg
gcgcatgcacaggtcgacatggccgcccaggccgaagcggccggcgccgacgagatcgtc
gttaccgcccgcaagcggcaggaagcgtcgcagaatgttccgctgtcggtcgccgcgttc
aacggcgagatgcttcagtcgcgctcggtcacgactgtttccgacatccagggcctcgtc
cccggccttcactatcaggagcgcggcaatctccagaccgagctgacgatccgcggcgtc
ggcggcgacgcccgcaaccccggcatcgacgccggggtcggcatgtatatcgacggcgcc
tatatcccgcgcacctccggctataatgccgacctgtccgacatcgcccaggtcgaagtg
cttcgcggcccgcagggcaccctgttcggcaagaacacgatcggcggcgtgatcaacatc
gtgacgaaaaagccgaccgaggaactgaccggtttcgtctatggcagctacggcaattat
gatgccgttcgtacccaggcggcgatctccggcgggctcgctccggcgctgtcggccaag
gtcaccgtggcgagctggaatcgccaaggctatatccgcaaccgcgtccggaacgagcgg
ttgaacaacgaagatcgtctcggcggccggctccagctccgctacaatccgggcacgcag
ctcgatgtcaatttctcggtcgacggcacgcgcgaccgccggcgcggcgtcctcaaccag
atcggctcgccggccggcgcggcggcgccctatttcaccggcaaccgcttcgtgatggat
gcggatcagcgcaacagcgacgcccgcgacatgtggggcatgacgctgggcatcgattat
gtcctggccaacgacatgacgatcacgtcggtcaccgcctatcgggacatcgatatcctg
gtctacagcgacatcgaccagaccccgctcgacctgttccactcggggccgtttaccgac
gacacgacgatgatcagccaggaattgcggctcgtttcgccgggcaacaagccgttccgc
tacgtgctgggcctcttcggctacaagcaggacatcgactccgaccgcgacatcttcatc
aacggcgcccgctcgatcgtcctcgatacggcggccaataccgacagctatgcggccttc
ggcaacttcgactatgatctgaccagtcagctgaccgccacggtcggcctgcgctattcg
atcgacaagaaggacggcaagttcaatcagcagcgaacgggactggactatgcgatcccg
ctcaagcggaccgacaagaacctctcctggacgggcagcctgctctacaagatcacgccg
cgcctcagcacctatgccacggtttcgcggggcttcaaggcgggcggattcaacctcgat
accgccggcgcggtcggcctcacggcatcggacctgaacttcctgccggagcgggtgacc
aattacgaggtcggcctgaagggccgcgcgaccgactggatgcgcttctcgctcgccgtc
ttccagatggactacaagaacaagcaggtttcccagttcgtcaatccgccggtcggcaat
gtgcccgtcgtgctggtcaccaatgccgggcaggcgcggatcaagggtgtcgagttcgac
acgacgctgaccccggtgcacggcctgtcgctgtcgggcaacgtcagctatctcgatgcc
aaataccggtccttcccgaacgccgccgtggtagggggcgtgctcgtctcctacaccggc
aacagggtggagcggaccccgaagtggaccgccggcggcagcatcgactatcgccatccg
atcggcagcggcgatctcgtgatgggcgccaacgtctcgtacaacggcgcggtcgatctc
cagccggacaacctgccgcgcaactatgaagggtcctacacgctggtcgacgcccggttc
ggctatgagatggccgacggcaaatggggcctgtatctctggggcaagaacctcaccaag
gagaacttcgcgaccttcaagcgccagttcgccggtctcgatcaggtggcctatggggcg
ccgagaacctatggggtggaagctcgcttcaagttctga
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