Rhizorhabdus wittichii DC-6: HY78_13915
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Entry
HY78_13915 CDS
T05200
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphd03032
]
HY78_13915
03036 Chromosome and associated proteins [BR:
sphd03036
]
HY78_13915
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_13915
DNA replication proteins [BR:
sphd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HY78_13915
Chromosome and associated proteins [BR:
sphd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HY78_13915
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HY78_13915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ARR57184
LinkDB
All DBs
Position
2881539..2881814
Genome browser
AA seq
91 aa
AA seq
DB search
MNTADIAGVVAAEQGIDKAAAKRVIDAALKAITDAAKKGDEVSLPGFGKFKVTDRPAREG
RNPATGATLTIAASKKVSFTAAKALKDALNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgccgacatcgcaggcgtcgtcgccgccgaacagggtatcgacaaggctgcc
gccaagcgcgtcatcgacgccgccctgaaggcgatcacggacgccgccaagaagggtgat
gaagtttcgctgccgggcttcggcaagttcaaggtcaccgaccgcccggcgcgcgaaggc
cgcaacccggcgaccggcgcgaccctgacgatcgccgcgtcgaagaaggtctcgttcacc
gccgccaaggcgctgaaggatgcgctgaacggctga
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