Rhizorhabdus wittichii DC-6: HY78_14020
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Entry
HY78_14020 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_14020
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Porin_2
Motif
Other DBs
NCBI-ProteinID:
ARR54467
LinkDB
All DBs
Position
2901708..2903900
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AA seq
730 aa
AA seq
DB search
MRLYHLFAAAAVAAIATGSAQAQTAPAADADNIGLEEIVVTAQKRSEKLQDIPVTVTALG
AEALERRQVLSVSDLQSIAPGVSVGQHAGYNRLFIRGIGLTSISSGQDPSVSFQVDGVVI
GRPSAQLASFFDLERVEVLRGPQGTLYGRNATGGSVNLITRKPTRDLSGYLDLTYGNYDR
IQLDGAISGPLDGKGDVRARIAFQKVKHDGYGRNVTLNEDVSDQDSWAVRGILQVDPAAN
VDITLSADYAREDDHNYPFNGFGPYRSDVPMPGLLLGGTLLPNSRDVTTEVPTRNDRTFW
GLSGTIGVDLGGGLRFQSITGYRKSRRANINDPETTSYAVFSPTLTAENARQFSQELQLL
YTSDRLNGVAGLFYYDESLKAELDLGFPVIGAALGFPAADYHEDGTIDIKAYAAFTQWTY
EVVDHLRLTAGVRYSDEKRRSNGTFTIFSFMPPPNAANVVVPVHVDKSWHALTPKFSIDY
KPVENVMLYASATRGFKSGVLLSGNPNPPVNPEYIWSYEAGIKSSFLDNRVQLNAAAFYY
DFKDLQVNRIINVSIVTENAAAARVKGAEVELRARPVEGVTLNADATYLDATFRKYSTKH
PARPELGLLDLSGNRLANAPKWSLNAGAEFDLPIGVPGRLSARGDVAWTGKVYFTEFNEN
LLSQDAVATVDASLQYESEDGHWRASLFGKNLTNRKIVANKFIAAQTTGFALNGGFKPPR
TYGLRIGYRL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgactatatcacctgttcgccgccgccgccgtcgcggccattgccaccggttccgcc
caggcccagacggcgcccgccgccgacgccgacaatatcggcctggaggagatcgtcgtc
accgcgcaaaagcgcagcgagaagctccaggacatcccggtgaccgtcaccgcgctgggc
gccgaggcgctcgaacggcggcaggtgctctcggtctccgacctccagtcgatcgcgccc
ggcgtgtcggtcggccagcatgccggctacaaccggctgttcatccgcggcatcggcctg
acctcgatctcctcgggccaggacccgagcgtctccttccaggtcgacggcgtcgtcatc
ggccggccctcggcgcagctcgcctccttcttcgacctcgaacgggtcgaggtgctgcgc
ggcccgcagggcacgctctacggccgcaacgcgaccggcggcagcgtcaacctgatcacc
cgcaagccgacccgcgacctcagcggctatctcgacctgacctacggcaattacgatcgc
atccagctcgacggcgcgatcagcgggccgctcgatggcaagggcgacgtccgcgcccgc
atcgccttccagaaggtcaagcatgacggctatggccgcaacgtgaccctcaacgaggac
gtcagcgaccaggacagctgggcggtgcgcggcatcctccaggtcgatcccgccgccaat
gtcgatatcaccctctccgccgattatgcgcgcgaggacgaccataattatccgttcaac
ggcttcggtccctatcgttccgacgtgccgatgccgggcctgctgctcggcggcacgctg
ctgcccaacagccgcgacgtgacgaccgaggtgccgacccgcaacgaccgcaccttctgg
ggcctgtcgggcacgatcggcgtcgatctgggcggcggcctgcgcttccagtcgatcacc
ggctatcgcaagtcgcgccgcgccaacatcaacgatcccgagacgacctcctatgcggtg
ttctcgccgaccctgacggcggagaacgcccggcaattctcgcaggagctccagctcctc
tacaccagcgaccggctcaacggcgtcgccggcctgttctactacgacgaatcgctcaag
gcggagctcgacctcggcttcccggtgatcggcgccgccctcggcttcccggccgccgac
tatcatgaggacggcacgatcgacatcaaggcctatgcggccttcacccagtggacctat
gaggtggtcgaccatctccggctgaccgccggcgtccgctacagcgacgagaagcgccgc
tcgaacggcaccttcaccatcttcagcttcatgccgccgccgaacgccgccaacgtcgtc
gtgcccgtccatgtcgacaagagctggcacgcgctgacgccgaagttcagcatcgactac
aagccggtcgagaatgtgatgctctatgcgtcggcgacgcgcggcttcaagagcggcgtg
ctgctgagcggcaaccccaatccgccggtcaatcccgaatatatctggtcctatgaggcg
ggcatcaagtcgagcttcctcgacaaccgggtccagctcaacgccgcggccttctactac
gacttcaaggacctgcaggttaaccgcatcatcaacgtctcgatcgtcaccgagaatgcg
gcggcggcgcgggtcaagggggccgaggtcgagctgcgggcgcggccggtcgagggcgtc
acgctcaacgccgacgccacctatctcgacgccaccttccgcaaatacagcaccaagcat
ccggcccgtcccgaactcggcctgctcgacctgtcgggcaaccggctcgccaacgcgccg
aaatggtcgctcaacgcgggcgcggagttcgacctgccgatcggcgtgcccggccggctg
tcggcgcgcggcgacgtcgcctggaccggcaaggtctatttcaccgagttcaacgagaat
ctcctctcgcaggacgcggtggcgacggtcgacgcctcgctgcaatatgagagcgaggac
ggccactggcgcgccagcctgttcggcaagaacctgaccaaccgcaagatcgtggcgaac
aagttcatcgccgcgcagacgaccggcttcgcgctcaacggcggcttcaagccgccgcgc
acctacggcctgcggatcggctaccggctgtag
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