Rhizorhabdus wittichii DC-6: HY78_14025
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Entry
HY78_14025 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_14025
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_14025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARR54468
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Position
2904417..2906609
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AA seq
730 aa
AA seq
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MAIEIRPVRIMSALAAGAALWQVPALAAAQTAAAVDDSGIAEIIVTAQRRSESLENVPIS
ITAATADMLTARGVNSMRDMIAAAPSVTLVTVAGYLQPRIRGIGNAAVGPGFEGGVAVYV
DGVYQAAPQANLFSLANIERVEILKGPQGTLFGRNTTGGLIQVITRQPSHDFGGTASVTA
ANYQDFTGDIYVTGGLSDTVAMNFAGHAEVQGKGWGDNIVTGKDAYRTYHDVAVRSSLLF
EPSDATKIRITGDYLDNRNNISPSTVLAPGTGFPFPGLILPTRTWDTASDVQPNSRVKSG
GATAQITQDLGFASLVSISAYRKARYSLVFDGDVSNLKLVSIDIGQSDRQFSQEVQLTSN
PDSKINWVLGAFYFNAAGRFDPNGVALDGFVRPSSPLGPVTGSFSYARLGTRSLAGYAQA
TAPITDATRLTLGIRYTRERKSLTDIESFTTFAALPAPVPGAPVADRSVRYNRPTWRVAV
DHRFSPQLLVYASYNRGFKSGGFNGQFPTDAAYLPERLDAYEVGAKANLFDRHLRIDVAG
FYYDYSNIQVSKFIGSQQSFYNGAAARVYGLDVDFEAKLSSRLSLSGGMTLLHDRFTRFP
NAVISTQVPTGIVITTGSAKGNRLPVTADFSATLTATHRTPLSFADLLVDLSYTYNDGYF
TQPDNILRQPSYNLLAAGARLDFPNGVNARLWMRNILNEKIFNTLQAGTFDSNASYQAPR
TYGITLGVKF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgaaattcgtcctgttcggatcatgtccgcgctggcggcgggcgcggcgctc
tggcaggtgccggcgctggcggccgcgcagaccgccgccgccgtcgacgattcgggcatc
gccgagatcatcgtgacggcgcagcgccgctccgagagcctggagaacgtgccgatctcg
atcaccgccgcgaccgccgacatgctgacggcgcgcggcgtcaattcgatgcgcgacatg
atcgccgcggcgcccagcgtcaccctggtcaccgtcgccggctatctgcagccgcgcatc
cgcggcatcggcaacgcggcggtcgggccgggcttcgagggcggcgtcgcggtctatgtc
gacggcgtctaccaggcggcgccgcaggccaatctgttctcgctcgccaatatcgagcgg
gtcgagattctgaaggggccgcagggcacgctgttcggccgcaacacgaccggcggcctg
atccaggtgatcacccgccagccgagccatgatttcggcggcaccgcatcggtgaccgcc
gccaactaccaggatttcaccggcgatatctatgtcaccggcggcctgtccgacacggtg
gcgatgaacttcgccggccatgccgaggtgcagggcaagggctggggcgacaatatcgtc
accggcaaggacgcctatcgcacctatcacgacgtcgccgtccgctcgtcgctgctgttc
gagccgagcgacgcgaccaagatccgcatcaccggcgactatctcgacaaccgcaacaac
atcagcccgtcgacggtgctggcgccggggaccggcttccccttcccgggattgatcctc
cccaccaggacctgggacacggcgagcgacgtccagccgaacagccgcgtcaagagcggc
ggcgccaccgcgcagatcacccaggatctcggcttcgcctcgctggtcagcatcagcgcc
tatcgcaaggcgcgctacagcctcgtcttcgacggcgacgtcagcaacctcaagctggtg
tcgatcgacatcggccagtcggaccgccagttcagccaggaggtccagctcacctccaac
ccggattcgaagatcaactgggtgctcggcgccttctacttcaacgcggcgggccggttc
gatcccaacggcgtggcgctggacggcttcgtcaggccgtcgagcccgctgggcccggtc
accggcagcttcagctatgcccggctggggacgcgctcgctggccggctatgcgcaggcg
accgcgccgatcaccgacgcgaccaggctgaccctcggcatccgctacacgcgcgagcgc
aagagcctgaccgatatcgagagcttcaccactttcgccgcgctgccggccccggtgccc
ggcgcgccggtcgcggaccgcagcgtccgctacaaccggccgacctggcgggtcgcggtc
gaccatcgcttctcgccgcagctgctggtctatgcctcctataatcgcggcttcaagagc
ggcggcttcaacggccagttcccgaccgacgcggcctatctgcccgaacggctcgacgcc
tatgaggtcggcgccaaggccaatctgttcgaccgccacctgcggatcgacgtcgccggc
ttctattacgactatagcaacatccaggtgtcgaagttcatcggatcgcagcagagcttc
tacaacggcgcggcggcgcgggtgtacggcctcgacgtcgatttcgaggcgaagctgagc
agccggctgtcgctgtcgggcggcatgaccctgctccacgaccgcttcacccgcttcccc
aatgcggtgatctcgacccaggtgccgaccggcatcgtcatcaccaccggatcggccaag
ggcaaccgcctgccggtgaccgccgatttcagcgcgacgctgaccgcgacccaccgcacg
ccgctgagcttcgccgacctgctggtcgacctcagctacacctataatgacggctatttc
acccagcccgacaacatcctgcgccagccgtcctacaacctgctggcggcgggcgcgcgg
ctcgacttccccaacggggtcaacgcccggctgtggatgcgcaacatcctgaacgagaag
atattcaacacgctccaggcgggtacgttcgacagcaacgcctcctatcaggcgccccgc
acctacggcatcaccctcggagtgaaattctga
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