Rhizorhabdus wittichii DC-6: HY78_14395
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Entry
HY78_14395 CDS
T05200
Name
(GenBank) hypothetical protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_14395
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARR54536
LinkDB
All DBs
Position
complement(2980962..2983580)
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AA seq
872 aa
AA seq
DB search
MSGHRHRASTRASDRWRHDRGSDCRSSLLPRERVETIRRRPVLSTTAGADRPSPARTEAP
FWLSQRYFGDSERTPRPVPRSLRSTRDMDRRFLRDLQKGTELMQPTFAKSISLPALLAIT
VSAVALAAPARAQDGVAADGEGGDIVVTARKARERLQDVPISVNALSGDQLRDRGAVDVK
DVLRSVPGLSFSGTERGLGNYNIRGISTVASAPTVGIYLDDISLVTIATSFSGAFDPVFF
DMERLEVLKGPQGTLYGGSSMGGAIKYVSARPKLNVTEGSVAAGIGTTAHGSASYNAEAV
LNLPLVADKLSVRGGVFYRHDGGYVDNVAAGTVTNSRYSSTAPGYTPQAQPSLSTRNQAN
YNDADTYVGRLSLLWQPDESWSIRPAAFYQHYKLANPGQFFLGMPELTASYRIKQPTTDK
AGIYSLAIDKELGAVQATSLTAYFDRKLDFVRDYSYFIGGLVPPLYPLTSRNLSASHTKT
FSQELRLASNDPGARLTWIAGLYYSHQDDRLYQIAVTPGATPVIGTEVGYVGDTTTITRQ
YAAFGEATYKLLDNLDITAGVRLFQIKQIVDILGDGPFNGGLTQIVGRKSNEKGVNPKVG
ISYKVTRDNLIYASAAKGFRPGGPNRFQINPALCATDLARLGLTAAPNTFDSDNLWSYEL
GTKNQFGSSVLVNAALFYTDWKKIQQQINLSSCGFAFTGNAGSADVKGAELETRFNLTRA
FQVGGTATYSDAKISTAALGTSAQDGDQVLAVPKWMLSGFASYSVEVADGWRGQIRGEYQ
YQSRSRRQFDRIQSVVFPGGVPGTAPNRAEFRQGYQVVNAFASVGDGETEVRLYLNNVFD
VAPRLDTDLTGGSDRSTTIRPRTVGLEVRRRF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggcatcgtcatcgagcatcaacccgagcgtcggatcgatggcgccatgatcgc
ggatcggactgtcgttcaagcctgctcccccgggaaagggtggagactatacgccggcgg
ccggtcctgtccacaacggccggggcggaccggccatcgccggcgcggaccgaagcgccc
ttttggctttcgcaaagatatttcggggattcggaaaggacgccccgccccgtcccccgc
agtctgcgatcgacccgcgacatggaccgaagattcctgcgcgaccttcaaaaggggacc
gaattgatgcagcccaccttcgccaagtccatttccctgcccgccctgctggcgatcacc
gtctctgccgtcgcgctcgccgcgccggcccgcgcgcaggacggcgtcgcggccgacggc
gaaggcggcgacatcgtcgtcaccgcccgcaaggcgcgcgagcgcctccaggacgttccg
atctcggtcaacgcgctgtccggcgaccagctccgcgaccgcggcgcggtcgacgtcaag
gacgtgctgcgcagcgtccccggcctgtccttctcgggcaccgagcgcggcctcggcaac
tacaacatccgcggcatcagcaccgtcgcctcggcgccgacggtcggcatctatctcgac
gacatctcgctcgtcaccatcgccacctcgttcagcggcgccttcgacccggtgttcttc
gacatggagcggctggaagtgctgaaaggtccgcagggcacgctctacggtggcagctcg
atgggcggcgcgatcaaatatgtcagcgcccggccgaagctgaacgtgaccgaaggcagc
gtcgccgccgggatcggcaccaccgcgcacggctccgcctcctataatgcggaggcggtg
ctcaacctgccgctcgtcgccgacaagctgtcggtgcgcggcggcgtcttctatcgccac
gacggcggctatgtggacaatgtcgccgccggcaccgtcaccaactcgcgctattcgagc
acggcccccggctacacgccgcaggcgcagccgtcgctgagcacccgcaaccaggccaac
tacaacgacgccgacacctatgtcggccgcctgtcgctgctgtggcagcccgacgagagc
tggtcgatccggccggccgccttctaccagcactacaagctcgccaatcccggccagttc
ttcctcggcatgcccgagctgaccgcttcctaccggatcaagcagccgaccaccgacaag
gcgggcatctacagcctggcgatcgacaaggagctgggcgcggtccaggcgacctcgctg
accgcctatttcgaccgcaagctcgatttcgtccgcgactacagctatttcatcggcggg
ctggttccgccgctctacccgctgaccagccgcaacctgtcggccagccacaccaagacc
ttcagccaggagctgcgcctcgcctcgaacgatcccggcgcgcggctgacctggatcgct
ggcctctattattcgcaccaggacgaccggctctaccagatcgcggtcacccccggcgcc
accccggtgatcggcaccgaggtcggctatgtcggcgacaccaccaccatcaccaggcaa
tatgccgccttcggcgaggcgacctacaagctgctcgacaatctcgacatcaccgccggc
gtgcggctgttccagatcaagcagatcgtcgacatcctcggcgacggcccgttcaacggc
ggcctgacccagatcgtcggacgcaagagcaacgagaagggcgtcaatccgaaggtcggc
atctcctacaaggtgacgcgcgacaacctgatctacgcctcggcggcgaagggcttccgc
cccggcggcccgaaccgcttccagatcaacccggcgctgtgcgccaccgacctcgcccgg
ctgggcctgacggcggcgcccaacaccttcgattcggacaatctgtggagctacgagctg
ggcaccaagaaccagttcggcagcagcgtcctggtcaacgccgcgctgttctacaccgac
tggaagaagatccagcagcagatcaacctgtcgagctgcggcttcgccttcaccggcaat
gccggcagcgccgacgtcaagggcgccgagctggagacccggttcaacctgacccgcgcg
ttccaggtcggcggcaccgcgacctacagcgacgccaagatctccaccgccgcgctcggc
accagcgcgcaggacggggaccaggtgctcgccgtgccgaaatggatgctgagcggcttc
gccagctacagcgtcgaggtggccgacggctggcgcgggcagatccgcggcgaatatcag
tatcagagccgctcgcgccgccagttcgaccggatccagtcggtggtcttccccggcggc
gtgcccggcacggcgcccaaccgcgccgagttccgccagggctatcaggtggtcaatgcc
ttcgcctcggtcggcgacggcgagaccgaggtccgcctctacctcaacaatgtcttcgac
gtggcgccgcggctcgacaccgacctgaccggcggatcggaccgttcgacgacgatccgg
ccgcgcaccgtcggcctcgaagtccggcggcgcttctaa
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