Rhizorhabdus wittichii DC-6: HY78_14810
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Entry
HY78_14810 CDS
T05200
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HY78_14810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_14810
Enzymes [BR:
sphd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
HY78_14810
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HY78_14810
RecFOR pathway proteins
HY78_14810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
GlgB_N
MMM1
Motif
Other DBs
NCBI-ProteinID:
ARR54612
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All DBs
Position
3056926..3057423
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AA seq
165 aa
AA seq
DB search
MILIGFDPGLGTTGWGVIAADGNRLSHVANGQIKTEPSMELSRRLYLLHSALAEIIRTYR
PEAAAVEEVLGNSNAQSTLKLGQARGVVLLAAALAEVSVGEYHPSIVKKAVVGTGGAEKR
QVQAMVKVLLPGAKLSGPDAADALAVAVTHAHHLASARAMRRVVA
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgatcggcttcgatccggggctcggcacgaccggctggggcgtgatcgccgcg
gacgggaatcggctgagccatgtcgccaatggtcagatcaagaccgaaccgtcgatggag
ctgtcgcgtcggctctatctgctccacagcgcgctggcggagatcatccggacctaccgg
cccgaggcggcggcggtcgaggaggtgctcggcaactcgaacgcgcagtcgaccctcaag
ctcggccaggcgcgcggcgtggtgctgctcgccgccgcgctcgccgaggtgagcgtcggc
gaatatcatccctcgatcgtcaagaaggccgtggtcggcacgggcggcgcggagaagagg
caggtgcaggcgatggtcaaggttctccttcccggcgcgaagctgtcgggccccgacgcg
gccgacgcgctggcggtggcggtcacccacgcccatcacctcgccagcgcgcgcgcgatg
cgccgggtggtcgcatga
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