Rhizorhabdus wittichii DC-6: HY78_15140
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Entry
HY78_15140 CDS
T05200
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_15140
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_15140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Adhesin_P1_C
Motif
Other DBs
NCBI-ProteinID:
ARR54673
LinkDB
All DBs
Position
complement(3124518..3126797)
Genome browser
AA seq
759 aa
AA seq
DB search
MTRKTVLSILAGVSLAALANGASAQTVPDQADDQRQGLEEIVVTARRQAENLQTTPVSVS
AVSEKMLARANVTQIDRITTMVPNVSIQQQSGFLGGNTAFIRGIGTQEPLLTVDSPVGIY
IDGIYVGRSNAANFALVDLQRVEVLRGPQGTLFGRNTTGGAISMTTKDPSEEMGGAIKLG
LANYRERQAAARFDTGKLGNSGIAATLSYQHMQHAGFTKNPFSSSRATTPGSLNSDAVWA
KVKGEWGDFSATYIFDWNDLRGLPLAQQPRFISNNVRGYYTNATNGGLFLSNVSESYKKS
LNLAIAGQQKVKIWGHGLTLEYHVSDALNFKSITGFRSYRANPLGTYYGPPGVFGPTTTG
IQEVYPFLSLKKVEETDQVSQEFQVLGDTGQFKYVAGLYYFKEDGSTTNPSNSTFVISPT
LASNTASVLQFGFKAKSYAAFGQASYRPAAFDDKLELTAGVRYTKDKKEVSQTLPSIRNG
KNTFNNTSFNAIVSYQFTDRVMTYARYGTGYRSGGFNTRASATQNFVFLPEKAKTVEAGI
KTEFFDRRLRWNAAVFNTDYSNLQVTQFVTTSVGNSGGFTSNAKATFKGFEGELQAVPVK
GLTLSSSLGYVDPKYKVFIAPNPAVPGTFFNAADQSEFPYVPKWTANASIQYEGDDVGFG
RPLARLAYSYMSNRFFHANQFSGNVFYRNIRSGANKRLDGRIGLTDIALGATTVDLSFYV
DNITNRHNIISGIDFGALGFAINSYAAPRRFGLDLKVSF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaaaacggtgttgagcatcctggccggtgtttcgctggccgccttggcaaac
ggcgcctcggcgcagaccgtccccgatcaggcggacgatcagcgccagggcctcgaggaa
atcgtcgtgaccgcccgccgtcaggcggaaaatctgcagaccacgccggtgtcggtgtcg
gcggtgtccgaaaagatgctcgcgcgcgccaacgtcacccagatcgaccggatcacgacg
atggtcccgaacgtctcgatccagcagcagtcgggcttcctgggcggcaacaccgccttc
atccgcggcatcggcacgcaggagccgctgctgacggtcgactcgccggtcggcatctac
atcgacggcatctatgtcggccgcagcaacgcggcgaacttcgcgctggtcgacctgcag
cgggtcgaggtgctgcgcggcccgcagggcacgctgttcggacgcaacaccaccggcggc
gcgatcagcatgaccaccaaggacccgtcggaggagatgggcggcgcgatcaagctgggc
ctcgccaattatcgcgaacggcaggcggcggcccgcttcgacaccggcaagctgggcaat
agcgggatcgcggcgacgctgtcctaccagcatatgcagcatgccggcttcaccaagaac
cccttctcgtcgagccgggcgacgacgccgggcagcctcaacagcgacgccgtctgggcg
aaggtgaagggcgaatggggcgatttcagcgccacctacatcttcgactggaacgacctg
aggggcctgccgctggcgcagcagccgcgcttcatctcgaacaacgtccgcggctattac
accaatgccaccaatggcggcctgttcctgagcaacgtcagcgagtcctacaagaagtcg
ctcaacctcgccatcgcggggcagcagaaggtcaagatctggggccatggcctgaccctc
gaatatcatgtgtcggacgcgttgaacttcaagtcgatcaccggcttccgctcctatcgc
gccaatccgctgggcacctattacggcccgcccggcgtgttcggcccgaccacgaccggc
atccaggaggtctatccgttcctgagcctcaagaaggtcgaggagaccgaccaggtctcg
caggaattccaggtgctcggcgacaccggccagttcaaatatgtcgcgggcctctattac
ttcaaggaggacggctcgacgaccaacccgtccaactcgaccttcgtcatctcgccgacc
ctggcgtcgaacaccgcatcggtgctgcaattcggcttcaaggcgaagtcctatgcggcc
ttcggccaggcgagctatcgcccggccgcgttcgacgacaagctcgagctgaccgccggc
gtccgctacaccaaggacaagaaggaggtgagccagacgctgccgagcatccgcaacggc
aagaacaccttcaacaacacctcgttcaacgcgatcgtctcctaccagttcaccgatcgc
gtgatgacctatgcccgctacggcaccggctatcgctcgggcgggttcaacacccgcgcc
tcggcgacgcagaacttcgtcttcctgcccgagaaggcgaagacggtcgaagccggcatc
aagaccgagttcttcgaccggcggctgcgctggaacgccgcggtgttcaacaccgactac
agcaacctgcaggtgacccagttcgtcaccacttcggtcggcaacagcggcggcttcacc
tccaacgccaaggcgaccttcaagggcttcgagggcgagttgcaggcggtgccggtgaag
ggcctgaccctgtcgagcagcctcggctatgtcgatccgaagtacaaggtgttcatcgcc
cccaatccggcggtgcccggcaccttcttcaacgccgccgaccagagcgaattcccctat
gtgccgaagtggaccgccaatgcgagcatccagtatgaaggcgacgacgtcggcttcggc
cggccgctggcccggctcgcctattcctacatgagcaaccgcttcttccacgcgaaccag
ttctccgggaacgtcttctaccggaacatccggtcgggggcgaacaagcggctcgacggg
cggatcggcctaaccgacatcgcgctcggcgcgaccacggtcgacctgtccttctatgtc
gacaacatcaccaaccgccacaacatcatctcgggcatcgacttcggtgcgctgggcttc
gcgatcaacagctatgcggcgccgcggcgcttcggcctcgatctcaaggtcagcttctga
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