Rhizorhabdus wittichii DC-6: HY78_15165
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Entry
HY78_15165 CDS
T05200
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00061
Fatty acid biosynthesis
sphd00071
Fatty acid degradation
sphd01100
Metabolic pathways
sphd01212
Fatty acid metabolism
sphd02024
Quorum sensing
sphd04146
Peroxisome
Module
sphd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HY78_15165
00071 Fatty acid degradation
HY78_15165
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HY78_15165
09145 Cellular community - prokaryotes
02024 Quorum sensing
HY78_15165
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphd01004
]
HY78_15165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphd04147
]
HY78_15165
Enzymes [BR:
sphd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HY78_15165
Lipid biosynthesis proteins [BR:
sphd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HY78_15165
Exosome [BR:
sphd04147
]
Exosomal proteins
Exosomal proteins of breast milk
HY78_15165
Exosomal proteins of breast cancer cells
HY78_15165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ARR54678
LinkDB
All DBs
Position
complement(3131343..3132809)
Genome browser
AA seq
488 aa
AA seq
DB search
MDVADRIRRSFRALGDRPAIEFRGRWVSWQEVGRFADRLDTLLAEAGVAPDARIGLVARN
RASHAAAMLALLAARRSISLVHPFLPAAALSAEVERLGAAALIADAEDWPPIAESCARIG
CAGIALGEEPFLPGPVDGLERATTVQAAHDGVIEILSSGTTGPPKRLPLPLHVLQRAVDS
APEGEGSDGPPPQINVWPLSGVGGLSLLAASGAQGAPLVLIEKFTAEALANAVRRHRPPM
LGLPPAAIRMTLDADIPRAHLASVIAIYGGSAPLDPDIQERFERHYGIPIHWGLGATEFC
GTIVRWTPAMRRAVGDAKRGSVGLPMPGVELRVIDPDDGSSIEDGREGLMQVRCPAIRPD
WVATTDLIRIDADGYVYHLGRHDGAIMRGGFKIMPERVADALREHRAVRDAAVVGLPDAR
LGAIPAAMVELHDGAEADETALLAHLRERLPSTQIPVRIAVADELPRTPSLKVSLAAVRA
AMEGSPTS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgccgaccgcatccggcgctccttccgcgcgcttggcgatcgcccggcgatc
gagtttcgcgggcgctgggtgagctggcaggaggtcggccgcttcgccgaccggctcgac
acgctgctggcggaagccggcgtcgcgcccgatgcgcggatcgggctggtcgcgcgcaac
cgcgcctcgcatgcggcggcgatgctggcactgctggccgcgcggcgctcgatcagcctg
gtccatcctttcctgcccgccgccgcgctgtcggccgaggtcgagcggctcggcgccgcc
gcgctgatcgccgatgccgaggactggccgccgatcgcggagagctgcgcccgcatcggc
tgcgcgggtatcgcgcttggcgaggagccgttcctgccggggccggtcgacgggctggag
cgcgcgacgaccgtccaggccgcccatgatggcgtgatcgagatattgtcgagcggcacc
accggcccgcccaagcggctgcccctgccgctccatgtcctccagcgcgcggtcgacagc
gcacccgagggcgagggcagcgacggtccgccgccccagatcaacgtctggccgttgagc
ggggtcggcgggctcagcctgctcgcggcgagcggcgcgcagggcgccccgctcgtcctg
atcgagaaattcaccgccgaggcgctggccaacgcggtgcgccgccaccggccgccgatg
ctgggcctgcccccggcggcgatccgcatgacgctcgacgccgacatcccgcgcgcgcat
ctggcgagcgtcatcgcgatctacggcggatcggcgccgctcgatcccgacatccaggag
cggttcgagcgccattacggcatcccgatccactgggggctgggcgcgaccgaattctgc
ggcacgatcgtccgctggaccccggccatgcgccgcgcggtcggcgatgcgaagcgcggc
agcgtcggcctgccgatgcccggcgtggagctgcgcgtgatcgatcccgacgacggatcg
tcgatcgaggacgggcgcgaggggctgatgcaggtccgctgcccggcgatccgtcccgac
tgggtggcgaccaccgacctgatccgcatcgacgccgacggctatgtctatcatctcggc
cggcacgacggcgcgatcatgcgcggcggcttcaagatcatgcccgagcgcgtcgccgac
gcgctgcgcgagcatcgcgcggtccgggacgcggcggtggtcggcctgcccgacgcgcgg
ctgggggcgatccccgccgcgatggtcgaactgcacgacggcgcggaggccgacgagacc
gcgctgctcgcgcatctgcgcgaacggctgccctcgacccaaatcccggtgcggatcgcc
gtcgccgacgagctgccgcgcaccccctcgctgaaggtcagcctcgccgccgtccgcgcg
gcgatggaaggaagcccgacatcatag
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