Rhizorhabdus wittichii DC-6: HY78_15295
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Entry
HY78_15295 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_15295
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_15295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ARR54700
LinkDB
All DBs
Position
complement(3160836..3163199)
Genome browser
AA seq
787 aa
AA seq
DB search
MDDRRHGPRGGLYSRHLITIGVAGLSIFPAPALAQQSAQASVDDEIIVTAQRREQNLLDV
PIAVTALQGRFLQDRSITTIDNLSALAPGLLVSSTATQPNNAQLSIRGSVQQNGSIILDP
SVGLYLDGVYIGKAQGSIFDINDLERVEVLRGPQGTLYGRNTLAGAISFITRKPDDQLRA
SAEAGFGNYDAHTIRGLVNVPLSEHLFVKLSGMTFKRDGNVRLVPDSAAIGGTPLGFIYN
NSVVGHPQGGGAQTGQAGTRNRQSLLAQVRYAPSADLTVDYSYDYSRTRGNADASQLDSV
DPNGFLGANCALGPAVCIPAYLYVQPKYSKTMSSDYTHLDRIEINGHGLTVTWNTGPVTL
KSITGYRKMDYDGAVVELDGTPLWLASGGLDTKYKSFSQELQATGTIGDRLNYVAGLYYF
WDDGFTRSPQSFFFGAVNYDTSWGGTTKAYAIYGQADYKITDRIVVTAGLRYTKERKTVV
RSSILLPNTVLVDVRKSDGVSKDFSALNPTIVLAYKPSDRLNTYVKFAQGYRSGGFNGEA
TSNIATTTPFRPETINSIEAGLKTSWWNGRADLNIAAFHNHHRNMQLSVFTATSSLASLL
QNAGSANMKGVEVEVSARPARALRISGNFAYLDASYSSYRDTNALGSVVDVADNRTIPHA
PKYQAALNVDLRAFEGSGGDNLHLIFDARHTSSYYLYAYAKTPTADFPLVPPSSSVKAQS
LTLLDLQLRYEDIPLGRSKGWIGAWTRNLANTHRKVNGINFGAQFGGLNIANYNEPRTYG
VSAGIRW
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcggcgtcatggtccgcgtggcgggctatattcgcgtcatctcattactatc
ggtgttgccggcttatcgatattcccggcgcccgctcttgcccagcaatcggcacaagca
tccgtcgacgatgagatcatcgtcacggcgcagcggcgcgagcaaaacctcctggacgtc
ccgatcgccgtcacggcgcttcaggggcgtttcctccaggaccggtcgatcaccaccatc
gacaatctgagcgcgctggcgccggggctgctggtcagctcgaccgcgacgcaaccgaac
aatgcccagctgtcgatccgcggctccgtgcagcagaacggctccatcatcctcgatcca
tcggtcgggctctacctggatggcgtctatatcggcaaggcgcagggatcgatcttcgac
atcaacgatctcgaacgcgtcgaggtgctgcgcggtccgcagggcacgctctacggacgc
aatacgctggccggggcgatcagcttcatcacccgcaagcccgacgatcagctgcgcgca
tccgccgaggccggcttcggaaactatgacgcccatacgatccggggcctcgtcaacgtc
ccgctgagcgagcatctgttcgtcaagctttccgggatgacgttcaagcgcgacggcaat
gtgcggctcgtgcccgattccgccgcgatcggcgggactccgctcggcttcatctacaac
aactccgtggtcggccatccccagggcgggggcgcgcaaaccggccaggccggcacccgc
aaccgacagagcctgctggcccaggtccgctatgcgccgagcgccgatctgaccgtcgac
tattcctacgactacagccgcacgcgcggcaatgcggatgccagccagctcgacagcgtc
gatcccaacggcttcctgggcgccaattgtgccttggggcccgccgtctgcatcccggcc
tatctctacgtgcagccgaaatattcgaagaccatgtcgagcgattacacccatctcgat
cggatcgagatcaacggacatggcctgaccgtcacctggaataccggcccagtcacgctc
aagtcgatcaccggctatcgcaagatggattatgacggcgcggtcgtcgaactcgacgga
acgccgctctggctcgcgagcggcggactggatacgaaatacaaatcgttcagccaggaa
ttgcaggcgacgggaacgatcggcgatcgactgaactatgtcgccggcctctattatttc
tgggacgacggcttcacccgcagcccgcaatcctttttcttcggcgcggtcaactacgac
accagctggggcggcacgacgaaggcctatgcgatctacgggcaggccgactacaagatc
accgaccggatcgtcgtgaccgccgggctgcgctacaccaaggagcgcaagaccgtcgtg
cgcagctcgatcctgctgcccaacacggtcctcgtcgacgttcgcaagtcggacggcgtc
tcgaaggacttctccgctctcaacccgacgatcgtcctcgcctacaagccgagcgatcgg
ctgaacacctatgtcaagttcgcgcagggctatcgtagcggcgggttcaacggcgaggcg
acctccaacatcgccaccaccacgcccttccggcccgagacgatcaattcgatcgaggcg
ggattgaagacatcctggtggaacggacgggccgacctgaacatcgcggccttccacaat
catcatcgcaacatgcagctgtccgtgttcaccgcgacgtcatcgctagcaagcctgctg
cagaatgccggatcggccaatatgaaaggcgtggaagtggaggtctcggcgcggccggct
cgggcgctgcggatttcgggcaacttcgcttatctcgacgcgtcctacagcagctatcgc
gacaccaacgcgctgggcagcgtcgtcgacgtggccgacaaccgcaccatcccgcacgcg
cccaaatatcaggcagcgctgaacgtggacctgcgcgcgttcgaaggatcgggcggcgac
aatctgcacctgatcttcgatgcgcggcacacgtcgagctactatctctatgcctatgcg
aagacgccgacggcggacttcccgctggtgccgccatcctcgtcggtgaaggcgcaatcg
ctcacgctcctcgatctccagctgcgttatgaggatatcccgctcggcaggtcgaagggg
tggatcggggcatggacgcgcaacctcgccaacacgcaccggaaagtgaacggcatcaat
ttcggcgcccagttcggcgggttgaacatcgcgaactataacgagccgcgcacctatggg
gtaagcgccggcatccggtggtag
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