Rhizorhabdus wittichii DC-6: HY78_15315
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Entry
HY78_15315 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_15315
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_15315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
LptD
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
ARR54704
LinkDB
All DBs
Position
complement(3166829..3169183)
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AA seq
784 aa
AA seq
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MVHSNLVVRLMATACIAGWMIPATAQPMDQDRAATAETDGLGDIVVTAQKREERLQDVPI
AISAIGADFLRSRDIGSIDQIGTIAPNVKVERSPTNKTVSQIAMRGSVTVNPSVLFEPAV
GLYVDGVYIAKAQGSIFDIADLERVEVLRGPQGTLYGRNTLAGAINLVTRKPSGELRGSI
EASYGNYDMKRVKGTIDLPAFGIFSIKLSGQAQKRDGFIDVVPNPYPQAFLARPSSVDDT
NDLNQRSLFAQVRVRPADSLTIDYAYDYSRYRQRPDFAQLHSFNRNGLPQDIFDPNSPGY
AGAGAFFPLDLYVRTQRQSSASLDADQLYERLRTDGHSLTLAWDLGTAELKSISAHRRTR
WSDALDLDGSPLPVGATQRFTRYRSFSQELQLTGGLADGRLKYVVGGYYFRDKGETLGPQ
SFFAGATSFQADYGQHTRAAAAYAQVDFDLTDRLVLTGGIRYNHERKDVSRLLVSGPGTP
AELTLIDIGYGDVPDAVYNSFSPAASLRFDLTERVNVYARYARGFKSGGFNGETTELVAA
TAACPSGAIELCQPYRPEKVDSYEVGLKSRLLDNRLQLNIAAFWDEHRDIQLSVFRGSGA
LSLSVLNAASSRIRGVELEFTARPSPVFTVSGSFALLDAKYKRFIDGGVDVSDNRAFPHA
PRYTASVSTDWRVIEGDWGRLNLLADLNFVASYYTYPYALAAPPSTTQVAGNSEAPSRAI
VNARAILADLPIGGMKGEISLWARNLFQQRSPSNFIDFGPSFGGMTLAFYPDPRTFGATF
GLRF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcaatcttgtcgttcgtctgatggccacggcctgcatcgccggatggatg
ataccggcgacggctcagcccatggatcaggaccgtgcggcgacagcggagacggacggc
ctgggtgacatcgtggtcaccgcccagaagcgcgaggagcggttgcaggacgtgccgatc
gcgatctccgcgatcggcgccgatttcctgcggagccgcgacatcggctcgatcgaccag
atcggcacgatcgcaccgaatgtgaaggtcgaacgctcccctaccaacaagaccgtctcg
cagatcgcgatgcgcggttcggtgaccgtcaatccctcggtgctgttcgagccggcggtc
ggcctctatgtcgacggcgtctatatcgccaaggcccaagggtcgatcttcgacatcgcg
gacctcgaacgcgtcgaggtgctgcgcgggccgcagggcacgctctatggacgcaacacg
ctggccggcgcgatcaatctcgtgacacgcaagccctcgggcgagcttcgaggatcgatc
gaggcgagctacggcaattacgacatgaagcgggtgaagggcacgatcgacctgcccgcg
ttcggcatcttctcgatcaagctgtcgggtcaggcgcagaagcgcgacgggttcatcgat
gtcgtgcccaatccctatccgcaggctttcctggcgcggcccagttcggtggacgacacc
aacgacctcaaccagcgaagcctgttcgcgcaagtgcgggtgcgaccggccgacagcctc
acgatcgactatgcctatgactacagccgctatcgccagcgccctgatttcgcgcagctc
cacagcttcaaccgcaacggcctgccgcaggatatcttcgacccgaactcgccgggctat
gcgggggccggcgccttcttcccgctcgacctctatgtgcggacccagcggcagtcgtcc
gccagcctcgacgcggaccagctgtacgagcggctgcgcacggatggccattcgcttacc
ctggcatgggatctgggaactgccgaactcaaatcgatcagcgcccatcgccgcacccgg
tggagcgacgcgctcgatctcgacgggtcgccgctgccggtcggcgccacccagcgcttc
acccgctaccgttcgttcagccaggagctgcaactcaccggcggtctggcggacggacgg
ctgaaatatgtcgtcggcggctattatttccgcgacaagggcgaaacgctggggccgcaa
tccttcttcgcgggcgccaccagttttcaggccgattatggccagcacaccagggccgcc
gccgcttatgcccaggtcgatttcgacctgaccgaccggctcgtgctgaccggcggcatc
cgctacaatcatgagcgcaaggacgtcagccggctgctcgtcagcggacccggaacgccg
gccgagctgacgctgatcgacatcggctatggcgacgtgcccgatgcggtctacaacagc
ttcagcccggccgcctcgctgcgcttcgacctgaccgagcgggtgaacgtctacgcccgc
tatgcccgcggtttcaaatcgggcggcttcaacggcgaaacgaccgaactggtcgccgcc
acggccgcctgcccgtcgggcgcgatcgagctttgccagccctaccgccccgaaaaggtc
gacagctatgaggtggggctgaaaagccggctgctcgacaaccggctccagctcaacatc
gccgccttctgggacgagcatcgcgacatccagctttccgtgttccggggcagcggcgct
ctgtcgctgtcggtgctcaacgcggcgtcgtcgcggattcgcggggtcgagctggaattc
accgcgcgtccgtcgcccgtcttcaccgtcagcggatcgttcgcgctgctcgatgccaaa
tataagcgcttcatcgacggcggcgtggacgtctccgacaatcgcgccttcccgcacgcg
ccgcgctacaccgcctcggtttcgaccgactggcgcgtgatcgagggcgattggggacgg
ctcaatctgctggccgacctgaatttcgtcgcttcctactacacctatccctatgcgctc
gccgccccgccgtcgaccacgcaggtcgcgggcaacagcgaggctccctcgcgcgcgatc
gtcaatgcgcgcgccatcctcgccgatctgccgatcggtgggatgaaaggcgagatctcg
ctctgggcgcgcaacctgttccagcagcgcagccccagcaacttcatcgatttcgggccg
agcttcggcggcatgacgctagctttctatcccgatccgcgcaccttcggcgcgacgttc
ggcctccgcttttga
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