Rhizorhabdus wittichii DC-6: HY78_17125
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Entry
HY78_17125 CDS
T05200
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphd03000
]
HY78_17125
Transcription factors [BR:
sphd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HY78_17125
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ARR55040
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Position
3579775..3580692
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AA seq
305 aa
AA seq
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MSRKLPPLLGLRVFECVARHLSFTRAADELCVTQAAVSHQIKALEEWMGGPLFQRLSRTI
KLTELGESLVAPIGQALDIMADATGRALDRDQNVPLTVGVFDSFSSAWIIPRLARFRERF
PAVDVRFIAKRQEDDALSSGDADIEIRFGNGSWPNFQVERLLTESVLPVCSPALIERHGA
PGSLADAPRFPLLHDVFSIDWSEFLQYFGVRGANVHRGFGFSHSHLVKQACIDGQGIALG
RWPLVAEDLESGALVRPFPEVLALDSAYYIVCRKAVSDEANIKAFAYWLLDEAELFVSQH
GASPT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtaagcttccccccctgctgggtctgcgcgtcttcgaatgcgtcgcccggcat
ctgagcttcacccgcgcggccgatgagctttgcgtcacccaggcggcggtgagccatcag
atcaaggcgctcgaggaatggatgggggggccgctgttccagcggctgagccgcacgatc
aagctgaccgaactgggcgagagcctggtcgcgccgatcggccaggcgctcgacatcatg
gccgacgcgaccggccgcgcgctcgaccgcgaccagaacgtgccgctcaccgtcggcgtg
ttcgattccttctcctcggcctggatcatcccccggctggcgcgcttccgggagcgcttt
cccgcggtcgatgtgcgcttcatcgccaagcggcaggaggacgatgcgctgtccagcggc
gacgccgacatcgagatccgcttcggcaacggaagctggcccaatttccaggtcgaacgc
ctgttgaccgaaagcgtgctgccggtgtgcagcccggcgctgatcgagcggcatggcgcg
cccgggagcctggcggacgccccgcgcttcccgctgctccacgacgtgttcagcatcgac
tggagcgagttcctgcaatatttcggcgtgcgcggcgcgaacgtccaccgcggcttcggc
ttcagccattcgcatctggtgaagcaggcgtgcatcgacggccaggggatcgccctgggc
cgctggccgctggtcgccgaggatctggaatcgggcgcgctggtgcgtcccttcccggag
gtgctggcgctcgattccgcttattacatcgtctgccgcaaggcggtttcggacgaggcg
aacatcaaggcgttcgcctattggctgctagacgaggccgagctgttcgtcagtcagcac
ggagcatcaccgacttga
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