Rhizorhabdus wittichii DC-6: HY78_17400
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Entry
HY78_17400 CDS
T05200
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphd03000
]
HY78_17400
Transcription factors [BR:
sphd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HY78_17400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ARR55091
LinkDB
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Position
complement(3645506..3646519)
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AA seq
337 aa
AA seq
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MSTIKMVAARAGVSTATVSRALSNPDIVVPETRAKVQAAIEELGYAPNFAAKSLRMLRTS
KIVMMVPDVSNPFFSEVLRRAEDMAEQAGYSVLLGDTRDDANREAQFADMLQRKEVDGVI
FLGHRMPVTLVNAVKDKGPRAPIVNSCDFSPAFGVSGVHIDNVRAAQEAMALLQSMGHRR
IGIITGPVESNITSDRLTGVKRAAETPGRETELLIRHADYTIEAGQRETERLLALPARPT
AIFCFSDEMAVGALAACRAYDLQCPRDLSIVGFDDIRYARYLDPPLTTVRQPMELIGKTA
VRLLLAIIDGTATETRVVTLDHELVVRGSTGPAPVLR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgatcaagatggttgcggcccgcgcgggcgtttcgacggcgaccgtgtcgcgc
gcgctcagcaatcccgacatcgtcgtcccggaaacgcgcgccaaggtgcaggccgcgatc
gaggagctcggctacgctcccaatttcgcggcgaagagcctgcggatgctgcgcacctcg
aagatcgtcatgatggtgcccgacgtctccaatcccttcttctcggaggtcctgcgccgg
gccgaggacatggcggagcaggccggctattcggtgctgctgggcgacacccgcgacgac
gccaaccgggaggcccagttcgccgacatgctccagcgcaaggaagtggacggggtgatc
ttcctcggccaccgcatgccggtgacgctggtcaacgcggtcaaggacaaggggcctcgg
gcgccgatcgtcaacagctgcgacttctccccggccttcggcgtttccggcgtgcatatc
gacaatgtccgcgcggcgcaggaggcgatggcgctgctccagtcgatggggcatcggcgg
atcggcatcatcaccggccccgtcgaaagcaacatcaccagcgaccggctgaccggggtg
aagcgcgccgccgagacgccgggacgcgagaccgagctgctgatccgccatgccgattac
acgatcgaggccgggcagcgcgagaccgagcgcctcctcgccctgcccgcgcgtccgacc
gcgatcttctgcttcagcgacgagatggcggtgggcgcgctcgccgcgtgtcgcgcctat
gatctccagtgcccgcgcgacctgtcgatcgtcggcttcgacgacatccgctacgcccgc
tatctcgatccgccgttgacgaccgtgcgccagcccatggagctgatcggcaagaccgcc
gtcaggctattgctcgccatcatcgacggcaccgccaccgaaacccgggtggtgacgctg
gaccatgaactggtcgtgcgcggcagcaccggtccggctcccgtcctccgctga
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