Rhizorhabdus wittichii DC-6: HY78_18590
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Entry
HY78_18590 CDS
T05200
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphd03009
]
HY78_18590
Enzymes [BR:
sphd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HY78_18590
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HY78_18590
Ribosome biogenesis [BR:
sphd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HY78_18590
23S rRNA modification factors
HY78_18590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_11
S4
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ARR55305
LinkDB
All DBs
Position
complement(3921105..3921863)
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AA seq
252 aa
AA seq
DB search
MVRGVRADQLLVDRGLVESRAKGQALILAGLVFSGDRKVEKAGQALKIDAPLEVRGRDHP
WVSRGGIKLAHGLKHFGWDAEGAIAIDVGSSTGGFTDVLLSEGAARVYAVDSGTNQLAWK
LRQDQRVVVLEQTNARHLTAMEIPESIDIVVCDASFISLTKVLPAALGFAKPGARLLALI
KPQFEAERSEVGKGGVVRDPLIHDRICTKIAEWVETQGWLNQGITASPITGPEGNVEFLI
GAIKADNRGRDA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaggcgtccgggctgatcaattgctagtagatcgcgggctggtcgagagtcga
gccaagggacaggccctcattttggcgggtctcgtgttttccggtgacagaaaggtcgaa
aaggcggggcaggcccttaaaatcgatgctccgctggaagttcggggacgtgatcacccg
tgggtgtctcggggcggcatcaagctcgcacatgggttgaaacatttcggctgggatgct
gagggtgccattgcgatcgacgtcggttcgtcgacaggaggcttcaccgatgtgctgctc
tccgagggggcagcccgtgtctatgcggtggactccggcaccaatcaacttgcatggaaa
ttgcggcaggaccaacgcgttgttgtcctcgagcagaccaatgcacgacatctcactgcg
atggagattccagaaagcatcgacatcgtcgtatgcgacgccagcttcatatcgctcacg
aaggtgcttccagcagcgctcggtttcgccaagcctggtgcgaggctgcttgccctcatc
aaacctcagttcgaggcggagcgaagcgaagtcggcaaaggcggtgtcgtccgcgaccct
ctgatccacgaccgcatttgcacgaaaattgccgaatgggtcgaaacccaaggttggttg
aaccaaggcattaccgcgagtcccatcaccggccccgagggcaatgtggagttcctgatc
ggagccatcaaagcggataaccgaggacgcgatgcctga
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