Rhizorhabdus wittichii DC-6: HY78_19130
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Entry
HY78_19130 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_19130
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_19130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
ARR55400
LinkDB
All DBs
Position
complement(4019920..4022253)
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AA seq
777 aa
AA seq
DB search
MLRKSAFALTLATCFTFSAQAKAADVPPAEADSGDLEGIIVIGRGETRSVSTLVPSNLDV
LPPGTSVQKALNFLPGVSAQSIDALGVNEQSLSLQVRGFNTTHLGYTLDGMPLGDGAYNN
YNGLTISRALISENLGRADLATGIAGLGIPSTSNLGGALTYFSSDPGKELGLKVNGTIGS
ESSKRVFARLDTGEHGGFSAYLSGQYSEQDLFVNQGAYKKSTGKQFNAKAQYEFEGGKIT
AFADLSRTNQADDTYLSKDMLGRLGWDWAGYAPDWQSYLGVAACSVKVPSVACAAAPAPQ
KNADVTFTNGQILRNDDLFYLAGDFDLTESIKLHVQGYHHEDKGAGNNFITGLSNQGTAS
TADDLPVQIRDTRYTIDRTGGLGSLSWTVGFNQFQAGFWLEENTSSAARYIRTDVTGPFS
LAKFLKGQPSTAQWVQETKWKTRQFYLQDTVALFDDALSVEFGFKGTYSKSDARAIDGIA
ATPPPTSSQFATGTLVAKDYFLPQAGLRWKIAPEHEVYASYSENMAMYQGGFKLGPQSVS
QAVWDLQGKTLKPETSKSFDGGYRYVSGPLQVSLAAYWVKFDNRLLQYNPCPTNQQQNPG
CGNSFHNAGSVTSRGVELGVLWNPLPWLSWYNSASYNKSTYDDDLNFCTATCVLKATAGK
QQVDTPKKMAASTLSLKYAGFSASVQGKYTGRRYYTYTNDQSFGGYVTVDLGLGYSFGDV
GPLKGAKLSLNVTNLTNKRYASNFDSSVFAPDDAAGTILVFHSSAPRQVFGTIGFDF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaagtccgctttcgcgctgacgcttgccacctgcttcacgttttccgcacaa
gcgaaggcggcggatgtgccgcccgcggaggcggacagcggcgaccttgaaggcatcatc
gtcatcggccgcggcgagacccgctcggtctcgaccctcgtaccgtcgaacctcgacgtg
ctgccgcccggtaccagcgtgcagaaggcgttgaacttcctgccgggcgtcagcgcgcag
tcgatcgacgcgctgggcgtcaacgaacagtcgctgtccctccaggtgcgcggcttcaac
accacgcacctcggctacacgctcgacgggatgccgctcggcgacggcgcctacaacaac
tataacggcctcaccatcagccgcgcgctgatctcggagaatctcggtcgcgccgatctc
gcgacgggcatcgccggcctcggcatcccctcgaccagcaacctcggcggcgcgttgacc
tatttcagcagcgacccgggcaaggagctgggcctcaaggtcaacggcaccatcggcagc
gagagcagcaagcgcgtcttcgcgcgcctcgacaccggcgagcatggcggcttctcggcc
tatctctccggacagtacagcgaacaggatctgttcgtgaaccagggcgcctacaagaag
tccaccggcaagcagttcaacgcgaaggcgcaatacgaattcgaaggcggcaagatcacc
gccttcgccgatctctcgcgcaccaaccaggccgacgacacctatctgtcgaaggacatg
ctggggcgcctcggctgggattgggccggctatgcgccggactggcagtcctatctcggc
gtcgccgcttgttccgtgaaggtcccgtcggtcgcctgcgccgccgcgccggcaccgcag
aagaacgccgacgtcaccttcaccaacggccagattctgcgcaacgacgacctgttctac
ctcgccggggatttcgacctcaccgagtccatcaagctgcacgttcagggctatcaccac
gaggacaagggcgcgggcaacaatttcatcaccggcctgtccaaccagggcacggcgtcc
accgccgacgatcttccggtccagatccgcgacacgcgctacacgatcgatcgcacgggc
gggctcggaagcctgagctggaccgtcggcttcaaccagttccaggcaggcttctggctg
gaggagaacaccagcagcgccgctcgctacatccgaaccgacgtcaccgggccgttcagc
ctggcgaagttcctgaagggccagccgtccaccgcccagtgggtccaggagaccaagtgg
aagacgcggcaattctaccttcaggacacggtcgcgctgttcgatgatgcgctgagcgtc
gagttcggcttcaagggcacctattcgaagtcggatgcccgggcgatcgacggcatcgcc
gcgacgccgccgccgacctccagccagttcgcgaccggcacgctggtggccaaggactat
ttcctgccgcaggccggcctgcgctggaagatcgcgcccgagcacgaggtctatgccagc
tattccgagaacatggcgatgtaccagggcggcttcaagctcggcccgcagtcggtgtcg
caggcggtctgggacctgcaaggcaagacgctgaagcccgagacctcgaagagcttcgac
ggcggctatcgctatgtgagcggcccgctgcaggtttcgctggccgcctattgggtgaag
ttcgacaaccgcctgttgcagtacaatccctgcccgaccaaccagcagcagaacccgggc
tgcggcaattccttccacaacgccggcagcgtcacgagcaggggcgtggaactcggggtg
ctgtggaacccgctgccgtggctgagctggtacaactcggcctcgtacaacaagtccacc
tatgacgacgacctcaacttctgcacggccacctgcgtgctcaaggccacggccggcaag
cagcaggtcgacacgccgaagaagatggccgcgagcacgctgagcctcaaatatgccggc
ttctccgcctcggtgcagggcaaatataccggccgccgctattacacctacaccaacgac
cagagcttcggcggctatgtcaccgtcgacctcggccttggctacagctttggcgacgtc
ggcccgctgaagggcgcgaagctgtcgctgaacgtcaccaacctgaccaacaagcgctac
gcgtcgaacttcgacagcagcgtgttcgcgccggatgacgcggcgggtaccatcctggtg
ttccactcgtcggcgccgcgacaggtcttcggaacgatcggctttgacttctaa
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