Rhizorhabdus wittichii DC-6: HY78_19185
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Entry
HY78_19185 CDS
T05200
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00630
Glyoxylate and dicarboxylate metabolism
sphd00680
Methane metabolism
sphd01100
Metabolic pathways
sphd01120
Microbial metabolism in diverse environments
sphd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HY78_19185
09102 Energy metabolism
00680 Methane metabolism
HY78_19185
Enzymes [BR:
sphd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HY78_19185
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Paralog
Gene cluster
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Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_21
Fer4_9
Fer4_10
Fer4_8
Fer4_15
Fer4_16
Fer4_2
Fer4_6
Fer4_17
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ARR55411
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Position
4033711..4036554
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AA seq
947 aa
AA seq
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MAWIGEIDLGTKAVPVTGPMVALTIDDQRVEVPEGTSIMRAAALMGTTIPKLCATDMLES
FGSCRLCLVEIDGRAGYPASCTTPVAPGMVVRTQTARLQELRRGVMELYISDHPLDCLTC
SANGDCELQDMAGAVGLREVRYGYEGENHLVAEKDESNPYFTFDSTKCIVCSRCVRACDE
VQGTLALTVDGRGFQSHIAASQDQDFLSSECVSCGACVQACPTSALIEKSVIEKGTPDRA
VVTTCAYCGVGCAFRAELRGEELVRMVPWKDGKANRGHSCVKGRFAWGYAQHRERILKPM
VRASVDQPWREVGWDEAIAHVASEFRRIQATYGTRSVGGITSSRCTNEETFLVQKLIRQG
FGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVQQADVIMVIGANPTDGHPVFASR
MKRRLREGARLIVVDPRRTDLVRSARIAADHHLPLKPGTNVAVLTAMAHVIVEEGLADEA
YIRERCDWDEYQDWAAFVAEPHRSPEATEALTGVPAAELRAAARLYATGGNGAIYYGLGV
TEHSQGSSTVMAIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHEYSGYRHVSD
PETRALFETAWGVPLDPEPGLRINNMLDAATDGVFKGLFIQGEDILQSDPNTTHVAAGLA
AMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQLVRKVMAPLNGHADWEI
VQLVARAMGLDWTYDHPSEIMDEIARLTPSFAGVSFDLIAEHGSIQWPANEKAPLGTPTM
HIGGFARGKGKFVVTDYVATDEKTGPRYPLLLTTGRILSHYNVGAQTRRTANVAWHPEDL
LEIHPLDAENRGIKDRDWVYLRSRAGETTLRASVTERVAPGVVYTTFHHPVTQANVITTD
YSDWATNCPEYKVTAVQVGLSNGPSEWQEDYSEQARQSRRILVEAAE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggatcggcgaaatcgacctcggcaccaaggcggtgccggtgaccggcccgatg
gtggcgctgaccatcgacgaccagcgggtcgaggtgcccgagggcacgtcgatcatgcgc
gcggcggcgctgatggggacgaccatccccaagctgtgcgcgaccgacatgctcgaaagc
ttcggctcgtgccggctctgcctggtcgagatcgacgggcgggcgggctaccccgcctcc
tgcacgacgccggtggcgccgggcatggtggtccgcacccagaccgcgaggctccaggaa
ctgcggcgcggggtgatggaactctacatctccgatcatccgctcgactgcctgacctgc
tcggccaatggcgattgcgagttgcaggacatggccggcgcggtcggcctgcgcgaggtg
cgctacggctatgagggggagaaccacctcgtcgccgagaaggacgagtccaacccctat
ttcaccttcgacagcaccaagtgcatcgtctgctcgcgctgcgtgcgcgcctgcgacgag
gtgcaggggacgctggcgctgaccgtcgacgggcgcggcttccagtcgcacatagccgcc
agccaggatcaggatttcctctcctccgaatgcgtgagttgcggcgcctgcgtccaggcc
tgcccgacctcggcgctgatcgagaagtcggtgatcgagaagggcacccccgaccgcgcc
gtggtcaccacctgcgcctattgcggggtcggctgcgccttccgcgccgagttgcgcggc
gaggagctggtgcggatggtgccgtggaaggacggcaaggccaatcgcgggcatagctgc
gtcaagggccgcttcgcctggggctatgcccagcaccgcgagcgcatcctgaagccgatg
gtccgcgcctcggtcgaccagccctggcgcgaggtgggctgggacgaggcgatcgcccat
gtcgcgtccgagttccgccgcatccaggcgacctacggcacccgttcggtcggcggcatc
acctccagccgctgcacgaacgaggagaccttcctcgtccagaagctgatccggcagggc
ttcggcaacaacaatgtcgatacctgcgcgcgggtctgccattcgccgaccggctatggg
ctgaagacgaccttcggcacatcggccggcacccaggatttcgacagcgtccagcaggcg
gacgtgatcatggtgatcggcgccaacccgaccgacggccacccggtcttcgccagccgg
atgaaacggcggctgcgggaaggcgcgcggctgatcgtcgtcgatccgcgccgcaccgat
ctggtgcgcagcgcgcgcatcgccgccgatcatcacctgccgctcaagccgggcaccaac
gtcgcggtgctgaccgcgatggcgcatgtcatcgtcgaggaagggctggcggacgaggcc
tatattcgcgagcgttgcgactgggacgagtatcaggactgggcggcgttcgtggccgag
ccgcatcgctcgcccgaggcgaccgaggcgctgaccggcgtcccggccgccgagctgcgc
gccgccgcccggctctatgcgaccggcggcaacggcgcgatctattacggcctcggcgtc
accgagcacagccagggatcgtcgacggtgatggcgatcgccaacctcgccatggcgacc
ggcaatatcggccgcgagggcgtgggcgtgaatccgctgcgcggacagaataatgtccag
ggttcatgcgacatgggcagcttcccgcacgaatattcgggctatcgccacgtctccgat
ccggagacgcgggcgctgttcgagacggcatggggcgtgccgctcgatcccgagccgggc
ctgcggatcaacaacatgctcgacgccgcgaccgacggcgtcttcaagggccttttcatc
cagggcgaggacatcctccagtccgatcccaacacgacccatgtcgccgccgggctcgcc
gcgatggaatgcgtggtggtgcaggacctgttcctcaacgagaccgccaactacgcccat
gtcttcctgccgggctcgaccttcctggagaaggacgggaccttcaccaatgccgagcgc
cgcatccagctcgtccgcaaggtgatggcgccgctcaacggccatgccgactgggagatc
gtccagctcgtcgccagggcgatggggctcgactggacctacgaccacccgtccgagatc
atggacgagatcgcccgccttacgccgagcttcgccggagtcagcttcgacctgatcgcg
gagcatgggtcgatccagtggcccgccaacgagaaggccccgctcggcacgccgacgatg
cacattggcggcttcgcgcgcggcaagggcaagttcgtggtcaccgactatgtcgcgacc
gacgagaagaccggcccgcgctatccgctgctgctgaccaccggtcgcatcctcagccat
tacaatgtcggcgcgcagacgcggcgcaccgccaatgtcgcctggcatcccgaggacctg
ctggagatacacccgctcgacgccgagaatcgcgggatcaaggatcgcgactgggtctat
ctgcgcagccgcgcgggcgagacgacgctgcgcgcttcggtgaccgagcgggtggcgccc
ggcgtggtctacaccaccttccaccatccggtgacgcaggccaacgtcatcaccaccgac
tattccgactgggcgaccaactgtccggagtacaaggtcacggccgtgcaggtcggcctg
tccaacggcccctccgaatggcaggaggattatagcgaacaggcgcggcagagccgccgc
atcctcgtcgaggccgccgaatga
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