Rhizorhabdus wittichii DC-6: HY78_19385
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Entry
HY78_19385 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_19385
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_19385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARR55448
LinkDB
All DBs
Position
complement(4079963..4082212)
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AA seq
749 aa
AA seq
DB search
MNKSRFFSLIATSSLICLLPGGALAQSDSPAAEGGLADIVVTATKSGQTALQSTPLAVSA
FSGQELSRTSTTGVADLARYTPSLKVGEVTASPSIYIRGIGTNNVFNGSDPNVAMLLDGV
YLARAFQQYSDFFDVDRVEVLRGPQGTTFGRNAVGGVINIVSRRPSDEFEGKAKLTVGNY
DLIRGEAFASGPLIPDVLAASVAGNYEYHKPYNRNIVPGKKGVASADRGGMRMQVRWTPN
DMIDATTRIDYNRLSQAMQSYDHLLVPYPAFLAPFFSLANSTVGKYHTVALDSPGHILNK
AWGIAEDVTFTFSEQVSLRSITAYRDSRYSLSLDADASEVAAAEIFQGERAKQFSQEFNL
VGNFDDFEGVLGLYYIKEHNRSDNRAIIYPPFGGELNVIAPDLRANSKAVFAQGSYHLPA
GFSVTAGGRYTKDTKKFDQIYSSFDFSNPPAVGGQLPGFPFDPPRLRRSWDDFSMKLGVD
WQANRDILAYATYSEGFKSGGFNYAAINTAGISFEPEHLKSYELGLKTQWLDRRVRLNLT
GFRYDYSGLQVQQSLSPGNVQITNAATARVKGIEAELVAQATPRLTLSANLSYLDAKYRR
FPTASVPDALVPFVEDDPRFTPGDDDAEDSGLFNASGNRLNNAPRLSYTLSAKYTQPIGR
GEAYLAADYYHQSSTHFDASNAAILREPGYGLVNLAIGYNSPDRLWNIQLLAKNLLDEDY
FVVRAANGLVPSAPSGPPRTVMFSVMRSF
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccagatttttcagcctgatcgcgacgtcgtcgttgatctgcctgctgccg
ggcggcgccctggcacagtccgactcaccggcggccgaaggcgggcttgccgacatcgtc
gtcacggcgacgaaatcgggacagacggcgcttcagtcgacgcctctcgccgtttccgcc
ttctccgggcaggaattgagccgcacgagcacgaccggggtcgccgacctggcacgctat
acgcccagcctgaaggtcggcgaggtcaccgcgagcccgtcgatctacatccgtggcatc
ggcaccaacaatgtcttcaacggctcggacccgaatgtcgcgatgctgctcgacggcgtg
tatctcgcgcgcgccttccagcaatattcggactttttcgacgtcgaccgggtcgaggtg
ctgcggggcccgcagggcacgaccttcggacgcaacgccgtgggcggcgtcatcaacatc
gtatcgcgccggccttcggacgagttcgagggcaaggccaagctcaccgtgggcaattac
gacctgatccgtggcgaagccttcgcgtcggggccgctgatccccgatgtcctggcggcc
agcgtcgcgggcaattacgaatatcacaagccctacaaccgcaacatcgtgcccggaaag
aaaggcgtggcgagcgccgaccgcggcggcatgcggatgcaggtccggtggacgcccaac
gacatgatcgatgccaccacccgcatcgactataaccggctgtcccaggcgatgcagagc
tacgaccatctgctggtcccctaccccgccttcctcgcccccttcttcagcctcgcgaac
tcgacggtcggcaaatatcacaccgtcgcgctggatagccccggccatatcctcaacaag
gcctggggcatcgcggaggacgtgaccttcaccttcagcgagcaggtgtcgctccgctcg
atcaccgcttaccgcgacagccgctacagcctgtcgctggacgcggacgccagcgaagtc
gccgccgccgagatattccagggcgaacgcgccaagcagttcagccaggagttcaacctc
gtcggcaatttcgacgatttcgaaggcgtcctcggcctctactacatcaaggaacacaac
cggtcggacaacagggcgatcatctacccgcccttcggcggcgagctgaacgtcatcgcg
cccgatctgcgcgccaattccaaggccgtcttcgctcagggttcctaccatcttccggcc
ggcttcagcgtgacggccggcgggcgctacacgaaggacaccaagaagttcgaccagatc
tattcgagcttcgatttcagcaatccccccgccgtcggcggccagctccccggcttcccc
ttcgatccgccacggctgcggcgaagctgggacgatttctcgatgaagctgggtgtggac
tggcaggcgaaccgcgacatcctggcctatgcgacctattcggaaggcttcaagagcggc
gggttcaactatgccgcgatcaacaccgccggcatcagcttcgagcccgagcatctcaag
agctacgagctgggcctgaagacccaatggctcgaccggcgcgtgcggctgaacctgacc
ggtttccgttatgactattccggcctgcaggtgcagcagtcgctttcgcccggcaacgtc
cagatcaccaacgccgcgaccgcaagggtcaagggcatcgaagcggagctcgtggcccag
gccacgccgcgcctcaccctgtccgccaatctcagctatctggacgcgaaatatcgtcgc
ttccccacggcgtcggtcccggacgcgctcgtgcccttcgtggaggacgatccgcgcttc
acgcccggcgacgacgatgccgaggattcgggcctgttcaacgcttcgggcaatcgcctg
aacaacgcgccccggctatcctacaccctctcggccaaatacacccagccgatcggtcgg
ggcgaagcctatctggcggccgattactatcaccagagcagcacccatttcgacgcgtcc
aatgccgcgatcctgcgcgagcccggctatggcctcgtcaatctcgcgatcggctacaat
tcgccggaccggctgtggaacatccagttgctcgccaagaatctgctcgacgaggactat
ttcgtggtgcgggccgcgaatggcctggtgccttccgcgcccagcgggccgccgcggacg
gtgatgttcagcgtgatgcgttccttctga
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