Rhizorhabdus wittichii DC-6: HY78_19755
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Entry
HY78_19755 CDS
T05200
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00550
Peptidoglycan biosynthesis
sphd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HY78_19755
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphd01002
]
HY78_19755
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
HY78_19755
Enzymes [BR:
sphd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HY78_19755
Peptidases and inhibitors [BR:
sphd01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
HY78_19755
Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HY78_19755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Beta-lactamase
Transpeptidase
DUF2711
Motif
Other DBs
NCBI-ProteinID:
ARR55514
LinkDB
All DBs
Position
complement(4150896..4151822)
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AA seq
308 aa
AA seq
DB search
MSVMPLPWAVSTTAPAEAASPLGAPRFSAVLMDADTNEILYAEQPTAIRHPASITKVMTL
YLVFDALDAGRLKLDDRVVMSPLAASQRPSKLGLGIGQSLSVADAISVVAVKSANDVAVA
LAEKIGGTEANFARMMTAKARQLGMRQTVFANASGLPNPGHFTSAQDIAILSAAMIRNHP
ARYHCFSEQSFSYGKLRMANHNKLLGNVPGVDGIKTGFTNDSGFTLTASAVRNGHRLIAV
VLGSPSGWQRDRDITSLLNAGFTALEIRGAGRSEDMAALLSSSGFALNRSLRPLPQIAAL
QVEEGDTE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgatgccgctgccttgggcggtttccacgacggcgccggccgaggccgccagc
ccgctcggcgccccgcgcttctccgcggtgctgatggacgccgacaccaacgagatcctc
tacgccgagcagccgaccgcgatccgccatccggcgtcgatcaccaaggtcatgacgctc
tacctggtgttcgacgcgctcgacgccggccgcctgaagctcgacgaccgggtggtgatg
tcgccgctcgcggccagccagcggccctccaagctcggcctcggcatcggccagtcgctg
tcggtggccgatgcgatcagcgtcgtcgcggtcaagtcggccaatgacgtcgcggtggcg
ctggccgagaagatcggcggcaccgaagccaatttcgcgcggatgatgaccgccaaggcc
cgccagctcggcatgcgccagaccgtcttcgccaacgccagcggcctgcccaatcccggc
catttcacctcggcgcaggacatcgccatcctgtcggcggcgatgatccgcaaccatccg
gcccgctatcattgcttctcggagcagagcttcagctacggcaagctgcggatggcgaac
cacaacaagctgctgggcaacgtccccggcgtcgacggcatcaagaccggcttcaccaac
gacagcggcttcaccctcaccgcctcggcggtccgcaacggccatcgcctgatcgcggtg
gtgctcggctcgccgtctggctggcagcgcgaccgcgacatcacctcgctgctcaacgcc
ggcttcaccgcgctcgagatccgcggcgccggccggtcggaggacatggccgcgctactc
tccagctcgggcttcgcgctcaaccgcagcctgcgcccgctgccgcagatcgccgcgctg
caggtcgaggaaggcgacaccgaatag
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