Rhizorhabdus wittichii DC-6: HY78_20730
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Entry
HY78_20730 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_20730
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_20730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARR55694
LinkDB
All DBs
Position
complement(4335508..4337865)
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AA seq
785 aa
AA seq
DB search
MAHGQTTATPADVPTAEVEGTEIVVTANKREQRITDVGLTITAYSGNTLKTQQIDSLAEI
AQIVPGLSYTPSQTATPVYTLRGVGFYESSLANYPTTSVYVDQVPLPFPVLTTHAAYDLE
RVEVLKGPQGTLFGQNSTGGAINFIPAKPTATFATGGDISYSRFNRIDANGYISGPIAEG
LKGRLSFNAAHADDWQKSYLRNDELGEVEYYAGRLLLDWTPSDRLTLNLNVNAWQDKSDP
QAPQFFGLQSQAPATLPPLIAAQPFTPHDARLAEWTPGANRPRANNRFAQAALRFDWEFA
DDIIFTGISSYIHYKHFQVVDQDGTELRDSDVAEDSGTIKSFSQELRIANAESSSLRWVL
GANYERSTVNEYARYDFPDESTSALFGFTGDQNTSDQKLRNYALFGNAEYDISPGLTIKA
GARYTKAKRRAVQCTFDNGDGTFARAIDTVVQLIHLGIIPVPGFTPSGVVPPSVGSGCTA
LDNLTNDGTPATYLPGAYKRSLNEDNLSWRVGLDYKVTPDLLLYANISRGYKAGSMPISS
AATFENYIEVKQESLLAYEAGYKFTSDGGRFRLNGAAFYYDYKDKQIRGAIVDPVFGNLQ
ALDNIPKSRIYGAEAEVSFIPLDGLTLGGSATYINSKITKYVNFSASNQVTDFAGSRIPF
TPKWSGSFTADYRWRVGSISPFIGASLSARSGTIANIGGDRGYVPPPGAVRQEVPLGRTF
DIDGYLLVDLRAGIAGENDQWRVTVFGKNVFDKYYILNTYKDFDTVNRLTGMPATYGVTV
SFNFR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttggcccatggacagacgaccgccacgcccgccgacgtgccgacggccgaggtcgagggc
acggagatcgtcgtcaccgccaacaagcgcgagcagcggatcaccgacgtcggcctgacg
atcaccgcttattccggaaacacgctgaagacgcagcagatcgactctctggcggagatc
gcgcagatcgtacccggcctgtcctacacgccgtcgcagaccgcgacccccgtctacacg
ctgcgcggggtcggcttctacgagtcttccctggcgaattatccgaccaccagcgtctac
gtcgatcaggttcccctgccatttccggtcctgaccacccacgccgcctatgacctggag
cgcgtcgaggtgctgaaggggcctcagggaacgctattcggccagaactcgaccgggggc
gccatcaatttcatcccggcgaaacccaccgcgacgttcgccacgggcggagacatcagc
tacagccgcttcaatcgcatcgatgcgaacggctatatcagcgggccgatcgccgagggg
ctgaaaggccgcctatccttcaacgccgcgcatgccgacgactggcagaaaagctatctt
cgcaacgacgagctcggcgaggtcgaatattatgccgggcgactgttgctcgactggacg
ccgtccgaccggctcacgctcaatctcaacgtcaatgcctggcaggacaagagcgatccc
caggcaccccagttcttcggccttcagagccaggcgccggccaccttgccgccgctgatc
gccgcgcagcccttcacgccgcacgatgcccgcctggccgaatggacgccgggcgccaat
cgcccccgcgccaataaccggttcgcgcaggccgcgctgcgcttcgattgggaatttgcc
gacgacatcatcttcaccggcatatccagctatatccactacaagcattttcaggtcgtc
gaccaggacggcacggaattgcgcgattccgacgtggccgaagacagcggaacgataaaa
tccttcagccaggagcttcgcatcgccaatgcggaatccagctcgcttcgctgggtgctg
ggcgccaattacgagcgcagcacggtcaacgaatatgcgcgctacgacttccccgatgaa
agcacctccgcgctgttcggcttcaccggcgatcagaatacgtccgaccagaagctgcgc
aactacgccctgttcgggaatgccgaatatgacatctcgcccgggctgacgatcaaggcc
ggcgcccgttacaccaaggcgaagcgcagggccgttcagtgcaccttcgacaatggcgac
ggcacatttgcgcgggcgatcgacaccgtcgtgcagctcatccatctcggcatcattccg
gtgccgggcttcacgccgtcgggcgtcgttccgccctcggtgggatcgggctgcacggcg
ctcgacaatctcacgaatgacggcacgcccgccacctacctgcccggcgcctacaagcgc
tccctgaacgaggacaatctctcctggcgggtggggctggattacaaggtcacgcccgac
ctcctgctctacgcgaacatatcgagaggctataaggcgggaagcatgccgatatcgtcg
gcggcgacgttcgagaactatatcgaagtcaaacaggaatcgctgctcgcctatgaggcc
ggctataaattcaccagcgatggcggacgtttccggttgaacggcgcggccttctattac
gactacaaggacaagcagatccgcggggcgatcgtcgatccggtcttcgggaatctccag
gcgctggacaatatccccaagtcgcggatctacggcgccgaagcggaggtcagcttcata
ccgctcgacgggctcacgctcggtgggtccgccacctatataaacagcaagatcaccaaa
tatgtgaacttcagcgcatccaaccaggtcacggattttgccgggtcgagaattccgttc
acccccaaatggtcgggttccttcacggccgactatcgctggcgcgtcggatccatttca
ccgttcatcggcgcgtccctttcggcgcgatcgggcacgatcgccaatatcggcggcgac
cggggctatgtcccgccgcccggcgccgtccggcaggaggtgccgctcggacggaccttc
gacatcgacggctatctgctggtcgacctgcgcgccggcatcgcgggcgaaaacgatcaa
tggcgggtgacggtgttcggcaagaacgtgttcgacaaatattatatcctgaacacctac
aaggacttcgacacggtcaaccgcctgacgggaatgccggccacctacggcgtcaccgtg
tcgttcaactttcgctag
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