Rhizorhabdus wittichii DC-6: HY78_20760
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Entry
HY78_20760 CDS
T05200
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00550
Peptidoglycan biosynthesis
sphd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HY78_20760
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sphd01003
]
HY78_20760
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
HY78_20760
Enzymes [BR:
sphd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HY78_20760
Glycosyltransferases [BR:
sphd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HY78_20760
Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HY78_20760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
CbiG_N
Motif
Other DBs
NCBI-ProteinID:
ARR55699
LinkDB
All DBs
Position
complement(4344573..4346690)
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AA seq
705 aa
AA seq
DB search
MRLPARRAWRRAALLGPLALLLALFVATLPPTMPGPAMVKAAWRPTESWLYDRDGRLLES
VRIDFTQRRLAWVPLDRMAPALPRAVIAAEDRRFATHGGVDWLALAGSIRDGLSGRRPRG
ASTITMQLAGFLAPELARPGARSLRQKTRQMRAAMALERGWSKDDILEAYLNLAGFRGEA
QGVMAASRQLFGKAPDRLSGDEALLLTALLPDPQAPPERVARRACAMKPADCPALTAIAA
RSLGTARRQRIDPGLAPHLARRLIDHAGMRVTTTLDGAIQRAAITALSRQLIGLGDQRAR
DGAVIVLDNATGDTLAYVGGVGGASTAAAVDGAGAPRQAGSTLKPFLYASAIERGYLTAG
SILDDSPVQLDTASGLYVPQNYDRSFRGPVSARSALAASLNVPAVRTLLLVGVNAFRDRL
WDLGYRGLTEDGDYYGFSLALGSAEVTLAEQANAFRALANAGRWSPARLRAEDRREASRP
VISPAAAWITADILSDPGARAGTFGLDSALRLPFWAAVKTGTSKAMRDNWCVGFSSRYTV
AVWVGNLEGDSMRAVSGTSGAAPVWREVMLALHRQAPPPRPARPADVESRAVRFADGIEP
PRTEYFLRGTGQALFGPAPPEARRARIASPVSGSIYALDPDIPGDRQRIRILVAGAVAGH
RLVLDRRDIGPADAQPLVLPGPGAHRLQLRRPDGGVADQILFTVR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagactgccggcgcgccgggcgtggcggcgggcggcgctgctcggcccgctcgcgctg
ctgctggcgctgttcgtcgccaccctgccgccgacgatgccggggccggccatggtgaag
gcggcgtggcgaccgaccgagagctggctctacgaccgcgacggccggctgctcgaaagc
gtccggatcgacttcacccagcgacggctcgcctgggtgccgctcgaccgcatggccccc
gctttgccccgcgcggtgatcgcggccgaggatcgccgcttcgccacccatggcggggtc
gactggctggcgctggccggatcgatccgcgacggcctgtcgggccgccggccgcgcggc
gcctcgacgatcaccatgcagctcgccggcttcctcgcccccgagctggcccggccgggc
gcccgttcgctccgccagaagacgcggcagatgcgggccgcgatggcgctggagagaggc
tggtcgaaggacgatatcctcgaagcctatctcaacctcgccggcttccggggcgaggcg
cagggggtgatggcggcgagccggcaattgttcggcaaggcgcccgaccggctgtcgggc
gacgaggcgctgctgctgaccgcgctcctgcccgatccgcaggccccgcccgaacgggtc
gcgcgccgcgcctgcgcgatgaagcccgccgactgcccggcgctgaccgcgatcgccgcg
cggtcgctcggcaccgcccgccgccagcggatcgatccggggctcgccccgcacctcgcc
cggcggctgatcgaccatgcggggatgcgggtgacgacgacgctcgacggcgcgatccag
cgcgccgcgatcaccgccctctcccgccagctcatcggcctgggcgaccagcgcgcccgc
gacggcgcggtgatcgtcctcgacaacgccaccggcgacacgctcgcctatgtcggcggg
gtcggcggcgcgtcgacggcggcggcggtcgacggcgccggggcgccgcgccaggccgga
tcgacgctcaagcccttcctctatgcatcggcgatcgagcgcggctacctcaccgccggg
tcgatcctcgacgacagcccggtccagctcgacaccgcctcgggcctctatgtgccccag
aattacgaccgcagcttccggggcccggtctcggcccgctcggcgctggcggcgtcgctc
aacgtgccggcggtgcggacgctgctgctggtcggcgtcaacgcgttccgcgaccggctg
tgggacctcggctatcgcgggctgaccgaggacggcgactattacggcttctcgctcgcg
ctcggatcggccgaggtgacgctcgccgagcaggccaacgccttccgcgcgctcgccaat
gccggccgctggtcgcccgcccggctgcgcgccgaggatcgccgcgaggcatcccgcccg
gtgatctcgcccgccgccgcctggatcaccgccgacatcctgtccgatccgggcgcgcgg
gcggggaccttcgggctcgacagcgcgctgcgcctgcccttctgggcggcggtcaagacc
ggcacatccaaggcgatgcgcgacaattggtgcgtcggcttttcgagccgctacaccgtc
gccgtctgggtcgggaacctggagggcgattcgatgcgcgccgtctccggcaccagcggc
gcggcgccggtgtggcgcgaggtgatgctggcgctccaccgccaggccccgccgccccgc
ccggcccgcccggccgacgtcgagagccgcgcggtccgcttcgccgacgggatcgagccg
ccgcgcaccgaatatttcctgcgcggcaccggccaggcgctgttcggccccgccccgccc
gaggcccgccgcgcccgcatcgccagcccggtgtcgggcagcatctacgcgctcgacccc
gacatccccggcgaccgccagcgcatccgcatcctcgtcgccggcgcggtggcgggccac
cgccttgtcctcgaccgcagggacatcggcccggccgacgcgcagccgctcgtcctgccc
ggcccgggcgcccaccggttgcaactgcggcgcccggacggcggcgtcgccgaccagata
ttgttcacggtgcgctag
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