Rhizorhabdus wittichii DC-6: HY78_21845
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Entry
HY78_21845 CDS
T05200
Name
(GenBank) TonB dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_21845
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_21845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARR55905
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Position
4603458..4605647
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AA seq
729 aa
AA seq
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MQDKLLKNRLFICGVGSILASLPMLSVPAFAQAEGAGADIRATDIGNEIVVTAQKRKERL
QDVPISISAVTGAEVAKRGLTNLRDLSQAALGLQATSPYANSNTKFAIRGVGATDFAQNY
QSPIGIYSDEVFLGSPIDSSFAMFDIDHAEVLRGPQGTLFGKNTTGGAISLTSALPKDHV
EGYVTVRGGNFGYIEPQAAISLPVTESLAVRFAGVLRDRDGTLKNLADHTRLNDVGQQAA
RFSALYKPGSDFEALLTLGYGRNDSNGMFGQPHDRLGQNPYEGYYNGFGLERIDTGNATL
KLTRDFGGFNLTSITAYRANKLHRKEEPDSGVGTSGDFQVDWRSKYHQTSQELRLASDSD
GRLTWMIGGYYYQDHLRANNSAQYPDPSDYFALNFRLHQDLRDFAAFGQATYKLLPKLNL
TIGGRFTTERQKFTYENRFTGMDNPFADGVAPALSYAENRTYNAWSGKVGLEYMATRDNL
IYASVSRGFNSGGHAGLAFSAAQLASTDPEYLIAYEVGTKNSFLDGALTLNLSGFYYDYK
DIIVTTVVDTGGATLASLKTNAARAHSKGFELETVVRPVRDLSLTAGAAYLDARYTRFVS
AVLGGDFTGNRLPSSPKWTLTGAFNYDLRLPGDKTLSFNADVQHVAPFYRDAQNTPQLRL
PSRTIANARITLQLENGLSLGLWSRNLFDEHYFTDAFTDPSIADVTGGAPYGYFYGDPRT
YGFEVGIRF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataagctattaaagaatcgcctttttatttgcggtgtcggatcgattctcgcg
tcgttgccgatgctttccgtcccggctttcgcgcaggcggaaggcgcgggagcggacatc
cgcgcgacggatatcggaaatgagatcgtcgtgacggcgcagaagcgcaaggagcggctg
caggatgttcccatctccatttccgcggtcaccggcgccgaggtcgccaagcgcggactc
accaatctgcgcgacctgagtcaggcggcactgggcttgcaggcgacctccccttacgcg
aactcgaatacgaaattcgccattcgtggcgtcggggccacggattttgcccagaattac
cagtcgccgatcggcatctattcggatgaagtctttctcggctcgccgatcgattcgagc
ttcgcgatgttcgacatcgatcatgctgaagtcctgcgtgggccacagggaacattgttc
ggaaagaacaccacgggcggagcgatcagcctgacgtcggctttgccgaaggaccatgtc
gaaggctatgtcacggtgcgcggcggcaatttcggctatatcgagccgcaagccgccatt
tcgcttccggtgacggagagccttgccgtccgctttgccggcgtgctgcgcgaccgtgac
ggcacgctgaagaacctcgccgatcatacgcgcctcaacgacgtcggccagcaggcggcc
cgcttctccgcgctgtacaagccgggatcggacttcgaggcgctgctgaccctgggctat
ggccgcaacgacagcaacggcatgttcggccaaccccatgaccgtctcggccagaatccc
tatgagggctattataacggcttcgggctggagcggatcgataccggcaatgccacgctg
aagctgaccagggatttcggcgggttcaacctcacctcgatcaccgcctatcgcgccaac
aagctccatcgcaaggaggagccggactcgggtgtcgggacatcgggggatttccaggtc
gactggcgttcgaaatatcaccagaccagccaggagcttcgtctggcatcggattccgac
gggcgcctcacctggatgatcggtggctattattatcaggatcatctgcgggcgaacaat
tccgcccaatatccagatccgagcgactatttcgcgttgaacttccgccttcaccaggac
ttgcgcgacttcgcggccttcggtcaggccacctacaagctgctgcccaagctcaacctc
accataggtggacgtttcacgaccgaacggcagaagttcacctatgagaaccgcttcacc
gggatggacaatccgttcgccgacggggtggcgccagcgctgtcctatgccgagaaccga
acctacaatgcctggtcgggcaaggtcggcctcgaatatatggcaacccgcgacaacctg
atctacgccagtgtatcgcgaggcttcaacagcggcggccatgccggcctggccttttcg
gcggcccaactcgcaagcaccgatcccgaatatctcatcgcctatgaggtcgggacgaag
aacagcttcctggacggcgccctgacgctcaacctttcgggattctactatgattacaag
gacatcatcgtcacgacggtggtcgataccggcggtgcgacgctggccagcctgaagacc
aacgcggcgcgggcccattcgaagggcttcgaactcgaaaccgtcgtgcggccggtccgt
gacctgtcgctgacggctggtgccgcctatctcgatgcgcgctatacgcgtttcgtgtcg
gccgtcctcggtggcgacttcacgggcaaccggcttccgagttcgccgaaatggacgctc
accggcgcgttcaactatgatctgcggcttccgggcgacaagacgctgagcttcaatgcg
gacgtgcagcatgtcgcgcccttctatcgcgatgcgcagaacacgccccaactgcggctg
cccagccgcacgatcgccaatgcgcgcataaccctgcaactggagaacggcctctcgctg
ggcctctggtcgcgaaacctgttcgacgagcattatttcaccgatgcgttcaccgatcct
tcgatcgccgacgtcaccggtggcgctccctacggctatttctacggcgatccccgaacc
tacggtttcgaggtcggcatccggttctga
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