Rhizorhabdus wittichii DC-6: HY78_21960
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Entry
HY78_21960 CDS
T05200
Name
(GenBank) TonB dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_21960
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_21960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARR55926
LinkDB
All DBs
Position
4633856..4636252
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AA seq
798 aa
AA seq
DB search
MEVDHRSRLGVAISIGAMVAAITAVPAAAQTAGASGGAVPATDAAGIGEIIVTAQKRSER
LSDVGMSITARTGDQLKTSGVTSINDFAKVDTSFSFGLSQSGTPVYTIRGVGYYDFALAA
PPTVSTYVDQVPLAFSALTKGVTLDLERVEVLKGPQGTLFGQNSTGGAINFIAAKPTSTF
QAGMEASIGRFTAINVNGFVSGPLSDTLRARLAFSADAGGAWQKSYTRDDTLGDRRFQTA
RLLLDWDASDRLTIAINLNGWRDRSDTQAGQLTGFPRPSALTDPSANVPVAVRDAIFNSP
LSPRNPRAADWGPIDPRADERFYQASLRADYEISDEVVLTSISSYSDFRTDSFYDIDGLA
IQNQSTRLDGDSKSFSQELRLGGKALDDRLDWVAGGNYASDKTHDGQFVDLTISAPAYAF
VGAGGPPWQVIRNQSNTDIDTYAAFANLSYKLADQLTIHGGARYTKSRNRFEGCTYDVGD
GIWAAGTNALQFVVKNFILQDPASFAPIGPGGCSTFDANFTPGLVRRKLTEDNVSWRAGV
DWKPMSDVLLYANVSKGYKAGAFQTSAFLSTVATAPVSQESVMAYEAGFKAFLLDRAVQI
DGAYFHYDYRDKQVNGAVPEPIVFGTLFGLINVPKSKLDGFELSSLWRPAEGLTVRANVT
YLDSRVVGDFVNVNRVGSASNFEGEAFPFTPKWSTLLGFQYERPVSDATVAYVGADYTYR
SSTQNGFGSLDFERIRGYGLLDLRAGIRSADNSWTAEIWGRNVTNTYYWNDATYVTDTSY
RRAGMPVAYGLRINYRFR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggatcatcggtcgcgtctcggcgtcgccatcagtatcggggcgatggtcgcc
gcgatcaccgcggtaccggccgcggcgcagactgccggagcgtcggggggcgccgtgccg
gccaccgacgctgccgggatcggcgagatcatcgtcaccgcgcagaagcgctcggaacgg
ctcagcgacgtcggcatgtcgatcacggcgcggactggcgaccagctcaagaccagcggc
gtcacctcgatcaacgacttcgcgaaggtcgataccagcttctcgttcggcctctcgcag
tcgggcacgccggtctacacgatccgcggcgtcggctattacgacttcgcgctcgccgcg
ccgccgacggtcagcacctatgtcgaccaggtgccgctcgccttctcggcgctgaccaag
ggtgtgacgctcgatctcgagagggtcgaggtgctcaaggggccgcaaggcacgctgttc
ggccagaactcgaccggcggcgcgatcaacttcatcgccgccaagccgacctcgaccttc
caggcggggatggaggcgagcatcggtcgtttcaccgcgatcaacgtcaacggcttcgtc
agcggtccgctcagcgacacgctgcgcgcccgcctcgcgttcagtgccgatgccggcggc
gcctggcagaagagctatacgcgcgacgacacgctcggcgaccgtcgtttccagaccgcc
cggttgctgctcgactgggatgcgagcgaccggctgaccatcgcgatcaacctcaacggc
tggcgtgaccggtccgatacccaggctggccagctcaccggcttcccgcggccgagcgcg
ctgaccgatccgtcggcgaacgtgccggtcgccgtgcgggatgcgatcttcaattccccg
ttgtcgccgcgcaatccgcgcgcggcggactggggcccgatcgatccgcgcgccgacgag
cgcttctaccaggcatcgctgcgcgccgactacgagatctcggacgaggtcgtgctcacc
tcgatctcatcctattcggacttccgcaccgacagcttctacgacatcgacgggctggcg
atccagaaccagtcgacgcggctcgacggcgacagcaagtccttctcgcaggagcttcgc
ctcggcggcaaggcgctcgacgatcggctcgactgggtcgccggcggcaattacgcgtcg
gacaagacccatgacgggcagttcgtcgacctgacgatcagcgcgccggcctatgccttc
gtcggcgcgggtggtccgccctggcaggtcatccgcaaccagtcgaataccgatatcgac
acctatgccgccttcgcgaacctcagctacaagctggctgaccaactcaccatccatggt
ggcgcccgctacaccaagtcgcgcaaccgcttcgaaggctgcacctacgacgtcggcgac
ggcatatgggcggcgggcaccaacgcgctccagttcgtcgtgaagaacttcatcctgcag
gatccggcatccttcgcgccgatcgggcccggcggctgctcgaccttcgatgccaacttc
accccggggctggtgcgccgcaagctgaccgaggacaatgtctcctggcgggccggcgtc
gactggaagccgatgtcggacgtgctgctctacgccaatgtcagcaagggctataaggcc
ggcgccttccagacatcggccttcctgtccacggtcgcgaccgcgccggtgtcgcaggaa
tcggtgatggcctatgaagcgggcttcaaggccttcctgctcgatcgcgcggtccagatc
gacggcgcctatttccattacgactatcgcgacaagcaggtgaacggcgcggtgcccgag
ccgatcgtcttcggcacgctgttcggcctgatcaacgtgcccaagtcgaagctcgacggt
ttcgagctgtcgtcgctgtggcgaccggccgaggggctgaccgtgcgggccaacgtcacc
tatctcgattcccgcgtggtcggcgacttcgtcaacgtcaaccgggtgggatcggcgtcc
aacttcgagggggaagccttccccttcacgccgaaatggtcgacgttgctcggcttccaa
tatgagcggccggtgtccgacgcgacggtggcctatgtcggcgcggattatacctaccgt
tcgtcgacgcagaacggcttcggcagcctcgatttcgagcggatccggggttacggcctg
ctcgacctgcgcgccggcatccgatcggccgacaatagctggaccgccgagatctggggc
cgcaacgtcaccaacacctattattggaacgatgcgacctatgtgaccgacacatcctat
cggcgcgccggcatgccggtcgcctatggacttcgtatcaactatcgcttccgttga
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