Rhizorhabdus wittichii DC-6: HY78_22115
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Entry
HY78_22115 CDS
T05200
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_22115
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_22115
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARR55952
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Position
4670762..4673170
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AA seq
802 aa
AA seq
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MSLCDGGTLSRTMKDIAGRKDRAGAVTACRSRWKTGRKKVGFESHSVKIARGKRFVLLAA
TALAGIGGPAFAQATTASADSGSDEIIVTALKRSTNLQDTPISISAVTGEAIANSGVQSI
ADLNSSVPSLAFVDGGPSNRRVVIRGIQAAGEPTVGTYYDETPVTGAIGAANDAGGSTPE
LRLFDVERVEVLRGPQGTLYGSGSMGGTLRVIYQKPTFATEGAVDLSLSDTRYGGLNYEG
SAMVNVPVVNDKIAVRAVGFYRNANGFIDNTALNIKNINDQKSYGGRFLVRFTPTEALTI
DAAAYINRSRTDTNAWTLTSGKFKSDALTRQPVRDNLELYSLTANYDFGGVVLTGVVSYL
DRDLDSVSDVSRFIRSTRTPAGCAARVSAGQPCSTAQLDNYYALVDSQSTSALFPQQTMK
SWTAELRLSSDGSGPLNWTVGGFYSDRDTSVANPQSNADPVSGAIIEPQQIATVRFIDDS
LRQVAAFGEFSYDVTDRLNLTAGGRYFRYNKDISGQTTIGSILVGAVVRPLSFVKSKEDG
TVFKFNGSYKVTDNVLFYAEAAQGFRPGGANQVIGLAQELTPYKSDSLWNYEVGFKNTLF
DRKLLLNVDVFQIDWSDMQITGRTPNGAFSFITNAGKARVRGAELEATIRPTAGFTITGN
ASYIDAKLRENQSNANVSAPGLKGDRIPYVPKFSAGIGAQYVWALTDTLSGFARIDGNTV
GGSYSDFRPTGTFTRKIDSYQLVNARLGVEGPDNKWGAYLFVTNLLDDTAITRSQSSAIA
VGRTLVNSAAPRTIGVNVRTRF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttatgtgacgggggaacgctttcccggaccatgaaggatatcgccggccgaaaa
gatagggccggcgcggtaacggcgtgccgatcgcgttggaaaacagggagaaaaaaagtg
ggtttcgaatctcattcggtgaaaatcgcacgcggcaagcgctttgtgctgttggcggcg
acggcccttgccgggatcggtggccccgctttcgctcaggcgacgaccgcgtcggccgac
agcggcagcgacgagatcatcgtgacggcgctcaagcgcagcaccaacctgcaggacact
ccgatctcgatttccgccgtcaccggcgaagcgatcgccaattcgggcgtgcagagcatc
gccgatctcaattcctcggttcccagcctggccttcgtggacggcggcccgtccaaccgc
cgcgtcgtcatccgcggcatccaggccgccggcgagccgacggtcggcacctattatgac
gagacccccgtcaccggcgcgatcggcgccgccaacgacgccggcggctcgaccccggaa
ctgcggctgttcgacgtcgagcgcgtcgaggtgctgcgcggtccgcagggcacgctgtac
ggatcgggatcgatgggcggcacgctgcgcgtcatctatcagaagccgaccttcgccacg
gaaggcgccgtcgatctgagcctgtccgacacgcgctatggcggcctgaactacgaaggc
agcgcgatggtcaacgtgccggtcgtgaacgacaagatcgcggtgcgcgcggtgggcttc
taccgcaatgccaacggcttcatcgacaacaccgcgctgaacatcaagaacatcaacgac
cagaagagctatggcggccgcttcctggtgcgcttcacgcccaccgaggcgctgaccatc
gacgcggcggcctatatcaaccgcagccggaccgacaccaacgcctggacgctgacctcc
ggcaagttcaagtcggatgcgcttacccgccagccggtgcgcgacaatctcgagctctac
agcctcaccgccaattatgatttcggcggcgtcgtcctgaccggcgtggtctcctatctc
gatcgcgacctcgactcggtgtcggacgtgtcgcgcttcatccggtcgacccgcacgccg
gccggctgcgcggcccgcgtcagcgccggacagccctgttcgaccgcccagctcgacaat
tattatgcgctggtcgactcgcagtcgacgtcggcgctgttcccgcagcagacgatgaag
agctggaccgccgaactgcggctcagctcggacggtagcggtccgctcaactggacggtc
ggcggcttctattcggatcgcgacacctcggtcgccaatccgcagagcaatgccgatccg
gtcagcggcgcgatcatcgagccgcagcagatcgccacggtccgcttcatcgacgacagc
ctgcggcaggtcgcggccttcggcgagttctcctacgacgtcaccgatcggctcaacctg
acggccggcggccgttatttccgctacaacaaggacatcagcggccagacgacgatcggg
tcgatcctggtgggcgcggtcgtccgcccgctctccttcgtcaagtcgaaggaggacggc
acggtcttcaagttcaacgggtcctacaaggtcaccgacaacgtcctcttctacgccgaa
gcggcgcagggcttccgccccggcggcgccaaccaggtcatcggcctggcgcaggagctg
acgccctacaagtcggacagcctgtggaactatgaggtcggcttcaagaacacgctgttc
gatcgcaagctgcttctcaacgtcgatgtcttccagatcgactggagcgacatgcagatc
accgggcgcaccccgaacggcgccttctcgttcatcaccaatgccggcaaggcacgcgtc
cgcggcgccgagctggaagcgaccatccgtccgacggccggcttcacgatcacgggcaac
gcgtcctacatcgatgccaagctgcgcgagaaccagagcaacgccaatgtcagcgcgccg
ggcctgaagggcgaccggattccctatgtgccgaaattctcggcaggcatcggggcgcaa
tatgtctgggcgctgaccgacacgctgtccggcttcgcccggatcgacggcaacacggtc
ggcggctcctattcggacttccggcccaccggcaccttcacgcgcaagatcgactcctat
cagctcgtgaacgcgcgcctcggcgtcgaaggaccggacaacaagtggggcgcctatctg
ttcgtcaccaacctgctcgacgacacggcgatcacccggtcgcagtcgagcgcgatcgcg
gtcgggcggacgctggtgaacagcgccgcgccgcgcaccatcggcgtcaacgtccgcacc
aggttctga
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