Rhizorhabdus wittichii DC-6: HY78_22555
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Entry
HY78_22555 CDS
T05200
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00071
Fatty acid degradation
sphd00362
Benzoate degradation
sphd00650
Butanoate metabolism
sphd01100
Metabolic pathways
sphd01120
Microbial metabolism in diverse environments
sphd01200
Carbon metabolism
sphd01212
Fatty acid metabolism
Module
sphd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HY78_22555
09103 Lipid metabolism
00071 Fatty acid degradation
HY78_22555
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HY78_22555
Enzymes [BR:
sphd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HY78_22555
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Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Methyltransf_12
Pyr_redox_2
adh_short
RS_preATP-grasp-like
Shikimate_DH
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ARR56031
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Position
4760132..4762168
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AA seq
678 aa
AA seq
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MTVSATLRGAILEIMVDNPPVNALGHAVRKGLLEALEAGARQPEVEAIVIACAGRTFFAG
ADISEFGKPPLDPILPDLCNAIEALAKPVVAAIHGTALGGGLEVALACHYRVAVPSARLG
LPEVKLGLIPGAGGTQRLPRLVGVAAATDMIVSGDPIPAGKAAELGLVDHVAADGSLIEE
AHRWAQAIAGRRPLPRTGERPVAGDAAAIDRYAEAHARKLRGQTAPQACFEALRAAIDLP
LAEGLAVERGLFRQLVAGDQSAALRHYFFAERRAARIDGLDASIEPLPIETVGVIGAGTM
GAGIAMAFLSKGLRVVLLETSADALDRGLANIRRTYEASVAKGRMTQEACDQALARLSTT
LDYAALGGCDLIIEAVFELMAVKREVFARIDAVARPGAILATNTSYLDIDEIAAATGRPD
HVVGLHFFSPANIMKLLEVVRGARTSPQVLATAMALAKRIGKIAVVAGNGYGFIGNRLLA
RRRSEAFELLLEGVAPWDIDEAHVGFGMPMGPFRMSDLAGVDIGWHRDPARVENVRDALC
AAGRLGQKAGKGYYDYDEARQATPSAEALAIIDAFARGQGRARRDVPRDDILERTLYAMV
DEGARLIAEGIAQRASDIDVVWVNGYGWPSYLGGPMHWAERTGLAHIVERLRAHGMPVAP
LLAEKAARGERFDDPQPA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtttccgcgacgttgcggggggcgatcctcgagatcatggtcgacaacccgccg
gtcaacgcgctcggccatgcggtccgcaagggcctgctggaagccctggaagcgggagcc
cggcagccggaggtcgaggcgatcgtcatcgcctgcgcgggccggaccttcttcgccggg
gccgacatctccgagttcggcaagccgccgctcgatcccatcctccctgacctgtgcaac
gcgatcgaggcgctcgcgaagcccgtggtcgccgcgatccacggcaccgcgctgggcggc
gggctcgaggtggcgctcgcctgccactatcgggtggcggtgccgtccgcccggctcggc
ctgcccgaggtcaagctgggcctgatccccggtgccggcggcacgcagcggctgccccgg
ctggtcggcgtcgccgcggccaccgacatgatcgtctccggcgatccgatcccggcgggc
aaggcggcggaactcggcctggtcgatcatgtcgccgccgacggatcgctgatcgaggag
gcgcatcgctgggcgcaggccattgccggccggcggcctcttccccgaacgggggagcgg
ccggtcgcgggggatgccgccgcgatcgatcgatacgccgaggcccatgcgcgcaagctg
cgcggccagacggcgccgcaggcctgtttcgaggcgcttcgcgccgcgatcgacctgcca
ctggcggaggggctcgccgtcgagcgggggctgttccgccaactcgtcgcgggcgaccag
tccgccgcgctgcgccactatttcttcgccgagcgcagggccgcccggatcgacgggctg
gacgcctcgatcgagccgcttcccatcgagacggtcggcgtcatcggcgccggcacgatg
ggcgccgggatcgcgatggccttcctgtcgaaggggctgcgggtcgtccttctcgaaacc
agcgccgacgcgctggaccggggcctcgccaatatccggcggacctacgaagccagcgtc
gccaagggccggatgacccaggaggcctgcgaccaggcgctggcccggctgtccaccacc
ctcgactatgccgcgctcggcggttgcgacctgatcatcgaggccgtgttcgaactgatg
gcggtgaagcgcgaggtgttcgcccggatcgacgcggtcgcgcggccgggcgcgatcctc
gccaccaacaccagctatctggacatcgacgagatcgccgcggcgaccggccggcccgat
catgtcgtcggcctccatttcttctcgcccgccaacatcatgaagctgctggaggtcgtt
cgcggcgcccggacctcgccccaggtgctggcgacggcgatggcgctcgccaagcggatc
ggcaagatcgcggtcgtcgccgggaacggctatggcttcatcggcaaccggctgctcgcg
cggcgccgcagcgaggcgttcgagctgctgctcgaaggcgtcgcgccctgggacatcgac
gaggcgcatgtcggcttcggcatgccgatgggcccgttccggatgtccgatctcgccggt
gtcgacatcggctggcaccgcgatcccgcccgggtcgagaatgtccgtgacgcgctgtgc
gcggccggtcgcctcggccagaaggccggcaagggctattatgattatgacgaggcgcgg
caggcgacgccgtcggccgaggcgctggcgatcatcgacgctttcgccagggggcagggc
agggcgcgccgggacgtcccgcgcgacgatatcctggaacgcaccctctacgcgatggtc
gacgagggcgcgcggcttatcgccgagggcatcgcgcagcgcgcgtcggacatcgatgtc
gtgtgggtcaacggctatggctggccgtcctatctcggcgggccgatgcactgggcggaa
cggacgggcctcgcgcacatcgtcgagcggctccgggcgcatggcatgccggtcgccccg
ctgctcgccgaaaaggccgcgcggggcgagcgtttcgatgatccgcagccggcatga
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