Rhizorhabdus wittichii DC-6: HY78_23150
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Entry
HY78_23150 CDS
T05200
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_23150
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_23150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF481
Motif
Other DBs
NCBI-ProteinID:
ARR56145
LinkDB
All DBs
Position
4901516..4903888
Genome browser
AA seq
790 aa
AA seq
DB search
MNYRHAKMILLSGCAIALCSGLQPAAAQVEEEGARSGGLEDIVVTARRRAESVQTTPLSV
SAFDSRSLQDRGLQNIADVSRAVPNVQLDPVANESGVASTQISIRGIGQTDYVLTVEPGV
AVYLDGVYVGKSLGSLLDTVDVERVEILRGPQGTLFGKNTIGGAIQVITKRPTADNQAEM
ELTTGRYDRLDARGAMSGPITDWLRFRLSASYQSRDGFMKRILRSGERTGEVQGDMNRLG
GRLVFEADVAPNLLATLAFDGTRIREKSPATYLRRVTEDAGFPRLFNLAVPGGVCAPAAG
ASRFSNPYCFNDQYSLPTDTRVTYNAGGNTADTDVRGVALTLDWKPGDINVKSITSFRKV
DVFVDQNLGGSAYYNSQVGQDIDFKSFSQEYQLSGNLLDKRLSYVLGAYYQREWGRQLFP
VQTALAQFLSGGDIKNDSYAAFGQLTYEITSRLSLTGGFRYTYETRRFNPGLQHVIGYDD
LSVIKIPGFVNPVANAFGTPGTPLFPAGWYKRNSKAGTPMISLSYKPVDDVMLYATYSKG
FKGGGFTMRFFPPVKPAAGVDPDTLIPYAKPEKATSYEAGIKSEWLGGKLRLNVAGFITD
YNNIQVTYTIDPDGPGPIGRFLPVLANSGSARIKGIEVESAAVPTDWLRIDGSLGYIDAK
YRKFTAAAIGAYPAALGFDLPNTPKWTYNVGTTVTFFDNESGNVFLRADWAYRSSQFKEF
SNNPSLFQKGYGILNAGLTYRSADRNWDVTLGGTNLTDKAYIVSGVASSDRAQAVRSRPR
EWYLTLRHKI
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcgccatgcaaagatgatcttgctgtcgggttgcgccatcgccctttgcagc
ggtctgcaaccggccgccgcgcaggtcgaggaagaaggcgcccgctcgggcgggctcgag
gatatcgtcgtcacggcgcgccgccgggcggaatcggtgcagacgacgccgctgtcggtg
tcggccttcgactcccgctcgctccaggatcgcggcttgcagaacatcgccgacgtctcg
cgcgccgtgccgaacgtccagctcgatccggtcgccaacgaatccggcgttgcgtcgacc
cagatatcgatccgcggcatcggccagaccgactatgtgctgaccgtcgagcccggcgtc
gccgtctatctggacggcgtctatgtcggcaagtcgctcggctcgctgctcgacacggtg
gacgtcgagcgcgtcgagatcctgcgcggcccgcagggcacgctgttcggcaagaacacg
atcggcggcgcgatccaggtgatcaccaagcgcccgaccgccgacaaccaggccgagatg
gaactgaccaccgggcgctacgaccggctcgacgcgcgcggcgcgatgtccggcccgatc
accgactggctgcgcttccgcctgtccgcctcctatcagagccgcgacggtttcatgaag
cgcatcctgcgcagtggcgagcggaccggcgaggtccagggcgacatgaaccggctgggc
gggcggctcgtcttcgaagccgacgtcgccccgaacctgctggcgacgctggccttcgac
gggacgcgcatccgcgagaagtcgccggcgacctatctgcggcgggtgaccgaggatgcg
ggcttcccgcgcctgttcaacctggcggtgccgggcggcgtctgcgcgccggcggcgggg
gcctcgcgcttctccaacccctattgcttcaacgaccaatattcgctgccgaccgacacg
cgcgtcacctacaatgccggcggcaacacggccgacaccgacgtgcggggcgtcgccctg
acgctcgactggaagccgggcgacatcaacgtcaagtcgatcacctcgttccgcaaggtc
gacgtgttcgtcgaccagaacctcggcggcagcgcctattacaacagccaggtcgggcag
gacatcgacttcaagtcgttcagccaggaatatcagctcagcggcaacctgctcgacaag
cggctgtcctacgtcctcggcgcctattaccagcgcgaatgggggcggcagctcttcccg
gtccagaccgcgctcgcgcagttcctgtcgggcggcgacatcaagaacgacagctatgcc
gccttcggccagctcacctatgagatcaccagcaggctctcgctgaccggcggcttccgc
tacacctatgagacgcgccggttcaatccgggcctccagcacgtcatcggctatgacgac
ctgtcggtgatcaagatcccgggcttcgtgaatcccgtcgccaacgccttcggcacgccc
ggcacgccgctgttcccggcgggctggtacaagcgcaacagcaaggccggcacgccaatg
atctcgctgagctacaagccggtcgacgacgtgatgctctatgcgacctattcgaagggc
ttcaagggcggcggcttcaccatgcgcttcttcccgccggtcaagccggcggcgggcgtc
gatcccgatacgctgatcccctatgccaagcccgaaaaggcgacctcctatgaggccggc
atcaagagcgagtggctcggcggcaagctgcgcctgaacgtcgcgggcttcatcaccgat
tacaacaacatccaggtcacctacacgatcgatccggacggcccgggcccgatcggccgc
ttcctgccggtgctcgccaattcgggttcggcccgcatcaagggcatcgaggtcgagagc
gcggcggtgccgaccgactggctgcggatcgacggcagcctcggctatatcgacgccaaa
taccgcaagttcaccgcggcggcgatcggcgcctatcccgccgcgctgggcttcgacctg
cccaacacgccgaaatggacctataatgtcgggacgacggtgaccttcttcgacaatgag
tcgggcaatgtcttcctgcgcgccgactgggcctatcgcagcagccagttcaaggagttc
tcgaacaacccgtcgctgttccagaagggctacggcatcctcaacgcggggctgacctac
cggtccgccgatcggaactgggacgtgacgctgggcggcaccaacctgaccgacaaggcc
tatatcgtcagcggcgtcgccagttccgatcgcgcgcaggcggtgcggtcgcggccgcgc
gaatggtatctgacgctgcggcacaagatatga
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