Rhizorhabdus wittichii DC-6: HY78_23300
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Entry
HY78_23300 CDS
T05200
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_23300
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_23300
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARR56175
LinkDB
All DBs
Position
complement(4938494..4940755)
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AA seq
753 aa
AA seq
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MRHLAGANTSFRACLLAGIGLSIAVPAAAQSPAAETGDIIVTALKRDTTLQDTPIAISAV
TGETLTKSGVRDIGALNAPSLNFVDGGPSSRRVVIRGIQAAGEPTVGVYYDETPVTGALG
AGNDAGSNTPELRLFDVERVEVLRGPQGTLYGSGSMGGTLRIIYNKPVFETRMAADVSLS
GTEDGGFNYLGNAMVNVPLMQDVMALRVTGFYGRDAGYIDNVALGIDNINKTKVYGGRAQ
LRIVPTSALKLDLAAFVNRSRTDTPSWALEAGRYKTDNLTRQPRRDDFELYSGTADWDLG
GVVATGVLSYAHLRSVAANDVSRYLAGNRSPGACAALVNANTPCGADKLADFYALVDDQV
PSALDPDQTVKTLTTELRLSSDGKGPLNWTVGGFYSRRHSLLANRHLHADPVTGELQPGR
PLLVLRNVDDLLKQVATFGELSWDLTDRLNLTAGIRYFKYDKVVSGETPIGNVLVRSAVL
PLTTVTSNEDGTTLKFNASYKITRDVMVYAGAAQGFRPGGLNQVIGLDPSLAPYRSDNVW
NYELGIKSTLFDRRLTLNADVFQIDWSDIQITGTTPNGAFRFITNAGSARVKGIEAEASL
RPVDGLLLEANGSYIDAKLTTDQKTATVSAPGKAGDRIPYVPKLTGSVAAEYRWAVGGDL
GAMVRIDLRHVGSSFSDFRPTGTFTRRLGAYELVNARIGLQTEDGRWGAYLFATNLFDKV
AVTRSTASALTGGRTFVNTVAPRTIGINLRTDF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatcttgcaggggcaaacacatcgttcagggcatgtctgctggcagggatcggg
ctgtcgatcgccgtcccggcggcggcgcaatcgcccgccgcggagaccggcgacatcatc
gtgaccgcgctcaagcgcgacaccacgctgcaggacacgccgatcgcgatctcggcggtg
accggcgagacgctcaccaagtcgggcgtcagggacataggcgcgctcaacgcgcccagc
ctcaacttcgtcgatggcggcccctcctcccggcgcgtcgtcatccgcggcatccaggcc
gcgggcgaaccgacggtcggcgtctattatgacgagacgccggtgaccggcgcgctcggc
gcgggcaacgacgccgggtcgaacacgcccgaactgcgcctgttcgacgtcgagcgggtc
gaggtgctgcgcggcccgcaggggacgctctacggctccgggtcgatgggcggcacgctg
cgcatcatctacaacaagccggtgttcgagacccggatggcggccgacgtcagcctttcg
gggaccgaggacggcggcttcaactatctcggcaacgcgatggtcaacgttccgctgatg
caggacgtgatggcgctgcgcgtgaccggcttctacggccgcgacgccggctatatcgac
aatgtcgcgctgggcatcgacaacatcaacaagaccaaggtctatggcggccgcgcgcag
cttcgcatcgtgccgacctcggcgctgaagctcgacctcgccgccttcgtcaaccggtcg
cgcaccgacacgccctcctgggcgctggaagccggccgctacaagaccgacaacctgacc
cgccagccacgccgcgacgatttcgagctctacagcggcaccgccgactgggatctcggc
ggcgtggtggcgacgggcgtgctgtcctacgcgcatctgcgctcggtcgccgccaacgac
gtgtcgcgctacctggcgggcaaccgcagccccggcgcctgcgcggcgctggtcaacgcc
aacaccccgtgcggcgccgacaagctcgccgacttctacgcgctggtcgacgatcaggtg
ccgagcgcactcgatcccgaccagacggtcaagacgctgacgacggaattgcggctcagc
tcggacggcaagggaccgctcaactggacggtcggcggcttctattcgcggcggcacagc
ctgctcgccaaccgccacctccatgccgatccggtgacgggcgagctgcagcccggccgg
ccgctgctggtgctgcgcaacgtcgacgacctgctgaagcaggtggcgacattcggcgaa
ctgtcctgggacctcaccgatcgcctcaacctgacggcgggcatccgctacttcaaatat
gacaaggtcgtctcgggcgagaccccgatcggcaacgtgctggtgcggtcggcggtgctg
ccgctcaccaccgtcacgtcgaacgaggacggcacgacgctgaagttcaacgcctcctac
aagatcacccgcgacgtcatggtctatgcgggggcggcgcaaggtttccggccgggcggc
ctcaaccaggtgatcgggctcgatccgtcgctggcgccctatcgctcggacaatgtctgg
aattacgagctgggcatcaagagcaccttgttcgaccggcggctgaccctcaacgccgac
gtcttccagatcgactggagcgacatccagatcaccggcaccacccccaacggcgccttc
cgcttcatcaccaatgcgggttcggcgcgggtcaaggggatcgaggccgaagcgtcgctg
cggccggtcgacggcctgctgctcgaagccaacggctcctatatcgacgccaagctgacg
accgaccagaagacggcgaccgtctccgcgcccggcaaggccggggaccgcatcccctat
gtgccgaagctcaccggatcggtcgcggccgaatatcgctgggcggtcggcggcgatctc
ggcgcgatggtgcggatcgacctgcgccatgtcggcagctcgttctccgacttccggccc
accggcaccttcacccgccgcctcggcgcctatgagctggtcaacgcccggatcggcctg
cagaccgaggacggccggtggggcgcctatctgttcgccaccaacctgttcgacaaggtg
gcggtgacccgatcgaccgccagcgcgctgaccggcggacggaccttcgtcaacaccgtc
gcgccgcgcaccatcggcatcaacctgcggaccgatttctga
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