Rhizorhabdus wittichii DC-6: HY78_23810
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Entry
HY78_23810 CDS
T05200
Name
(GenBank) rRNA (cytidine-2'-O-)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphd03009
]
HY78_23810
Enzymes [BR:
sphd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
HY78_23810
Ribosome biogenesis [BR:
sphd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HY78_23810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
ARR56265
LinkDB
All DBs
Position
complement(5044812..5045693)
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AA seq
293 aa
AA seq
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MNQITEPGATDAQASEAPLPPGLYIVATPIGNLGDLSPRAASVLTRAETIAVEDSRVTAK
LLQRLGVKRPMTPYHDHNADKVRPGLIARMATQAVALVSDAGTPLISDPGYKLVRDARAA
GITVTTLPGPCAAIAALTLAGLPTDRFFFLGFLPAKDKARAEAIAEVADVRATLILYEAG
PRLGATLQALADGLGDREAAVVREISKTFEESVLGPLSDLAERYRESGPKGEIVIVVGPP
GPRAAASPEDADALLRAALAHLPAAKAAGEVARATGLNRRELYARAMAIKDGD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaattaccgaaccgggggcgaccgatgcgcaggcatccgaagcacccctcccc
cccggcctgtatatcgtggccacgccgatcggcaacttgggtgatctctccccgcgcgcc
gcgtcggtcctgacccgggccgaaacgatcgcggtcgaggacagccgcgtcaccgccaag
ctgctccagcgcctcggggtgaagcggcccatgacaccctatcatgaccataatgcggac
aaggtgcgccccggcctgatcgcgcggatggcgacccaggcggtggcgctggtctccgac
gcggggacgccgctgatctccgatcccggctacaagctggtgcgcgacgcgcgcgcggcc
gggatcacggtcaccaccctgcccggcccctgcgcggcgatcgcggcgctgacgctggcg
gggctgcccaccgaccgcttcttcttcctcggcttcctccccgccaaggacaaggcgcgc
gccgaggcgatcgccgaggtcgcggacgtccgcgcgaccctgatcctctacgaggccggc
ccgcgcctcggcgcgaccctccaggcgctcgccgacggcctcggcgatcgcgaggcggcg
gtggtgcgcgagatcagcaagaccttcgaggaaagcgtgctcgggccgctctccgacctc
gccgagcgctatcgcgagagcggccccaagggggagatcgtcatcgtcgtcggcccgccc
ggcccgcgcgccgccgcctcgcccgaggacgccgacgcgctgctccgcgccgcgctcgcc
catctgcccgccgccaaggcggccggcgaggtcgcccgcgccaccgggctcaaccgccgc
gagctctatgcgcgggcgatggcgatcaaggacggcgattga
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