Rhizorhabdus wittichii DC-6: HY78_24325
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Entry
HY78_24325 CDS
T05200
Name
(GenBank) hypothetical protein
Organism
sphd
Rhizorhabdus wittichii DC-6
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
LysM
DUF6531
LcnD_C
Motif
Other DBs
NCBI-ProteinID:
ARR56358
LinkDB
All DBs
Position
complement(5157247..5165778)
Genome browser
AA seq
2843 aa
AA seq
DB search
MATMVAIFTGAGFGLGRGSGSVLGGVGLLGGASQGRSGDAISVNAATGNLLIQQQDEFLV
GRGPDASVARTYNSLTSLADDNNDKWRQSTDRRVYGLTGTLNTAGSTVKRVSGDGTEIVY
TWDATRSAYVTKDGGGAYDTIVKSGTEWLWTDGDTRTVERYSDDATGKIKSVADNVGTVM
SFTYDGSGRLSQVTTNDGAWIRYDWSGSTNNISQIVTGYTDLATSTSKTLTRTRYGYDAS
NRLTSVTVDLSPGDNSISDGKTYVTTYGYDASNRVNSITQSDGSAMTITYDGSGRVSTLV
QTVASGVTRTTTLNYYSGYSTVTSPDGQVTRLDYDASGNLTKITAPPAYSGATAQVWQFA
YNANGDVTSTTDALGKVTTYANFTANGLAQTVTDRAGNATTRTFDAANHVLSETWNGIDA
TGASVSQSVRYVYNAAGDLRFAITAEGRVTEYVRNAYGAVTSEIHYVEAAYTTTGTPAES
TMTTWTAGLSDKSWVQRVDYTYDARLGLVKATSYGIASAAGAGQTTQGIGEVNYVYDQAG
KLLSSYATGQGATTYVYDGMGRMTASTDAAGNATSIVFDDANTKTTITNSGGRTIVETYN
KAGDLIQHSESGTNATATTVSYAVDKLGRTRVTTFTGSTDKIYDLYDAAGRHVATVDGSG
RITEYRYDADNRLVGMIAYRNTVSSSYFTTLDNPDNTLALSTIRPAVHAEDVSSWTIYDA
EGRVLQTIAGDGSTVISTYDAAGRLQKTTSYVNKVAAATVAGFIAAAPTAVITPTANAGD
VSKRYFYDKDGRLIGTIDGEKYVVRNTYDQAGQLVATTAYANATAAASPTTASFNTIIAG
VPTSAQDRTTRYVYDGRGELRYTIDGLGNAIRHDYDAAGLETRTVAYGTALGTLTDYTFD
NVLAQLATQESGTAKRVSFAVYDTAGRLAYSLDQTGAASTSTDMAVTAYVYDSVGNVIRT
IEYATARPTTILPTKATMDSWIASAGNAADRVTRMWYTGRNQLAYRVDAEGYVSKFTYDA
KGRVINETVWENAIAVSDSTTYAQVVAAATGTSYSNSRTYDALDRVVRQYDFSGTNYTEY
TYLGATKLVSTVMRAAGGTAQEQSTLTNVYDGAGRVIRSTDATGATEAAATNYSYDGRGV
MTSMVDPRSKTTSYTYDLDGRVKTMTDAASGVTTYDYNAFGQVWKVTDARGNASYSWYDK
AGRVTTTRDAENFLTTTAYTAFGEIASVKRWATAATGTPAIGTEPAGSGTVATTQFTYDK
AGRVLTSVNALNQTESYAYNNFGDRISVTNRLSTVTSYTVDRLGRVTRESVNAATANING
AGTVSTGAQNVKTYAYDSRGNVKTLVEGFSTTAGGAVTALRTTAYAYNALSQVTTVTYNA
VTVIADDMVTTSSATPTEQFTYDKRGNVIKSVDKAGAQTFSFYDDLDRKIAEIRQLSATQ
AVYTSYAYDGNGNLLTTKVYEGNAALPSTPGGTPPAVPSGLYRQTDFAYDNLNRMTTSTV
VSNTGNVITSGNWNGTSYAQAAGSLVTQYQYDAEGNIVKVTDANGAVTWNWYDKLGRKTD
QLDGEGYLTHWTYDAEGHVLTEVRYATKFTGTPVLGTPPTVSTTGNDRTTVYTYDLNGNR
LTEKRTGVTAWTVNASTGALTAAGTDAIISYAYNALGQVTTKTVAGTLIATYGYDGTGRL
TSEQKAAYSDANGTSVTPTTNYEYDAIGDLTRTTQLGAAGTYAAADRVTTYRYADGGRLV
GMVDAEGFAHSYYYDVAGRLKKDAYNRVVNTNNTTSSNTTTTIAEAQTSTYDLSGRVLTQ
SIYSTVAGTFKRIGLTSYQYNNFGQVTQQGTGTNSATDISAGTALYQVTNQYDAAGRLIG
TNSGDGVWKFFGYDKAGNQTVAVTSAGATFTSGTGLATALSQVANANVNGTYTVYDKRGQ
ATQVVEEGRDLSATATNQTLTTSRTYNAFGEVATETDARGYAITYTYNTMGRMVRSESPG
VQITNENGGTNWVKPSEDYYYDLGGRMIATRDANGTYGAGTSGAPASKSANTGNLTTYAL
LAGTGYDGSESVIATEFHSDGGKKQMLYDRMGDARVVRDELYSASTPYLRVTEQNFNKLG
QLTQVKHNRLTNVADDTTRLIDNYAYDQFGQRIQHFTNGVQNPIYGDPIWIDEYNYYTPI
IGYENIYEKASYDGLGRVTAQIDMSGYVTTTAYAWDGTLATSGVGTFGGFAETTTYANSR
TAISKSDIFDREVFRQDLGSHQFAATFDAGGRQLTSGSNSYTWYNTGMLATSALVTGTLG
TDDWSRKLTTYGYDKVGNRTSEKLINDGSKTTWYYSYYYSYPIVETFNYQYVNETATYDA
LGRLLTMSEAGSTDTPAASITNTYDAAGNVRSTVSTHAVLNLNGAVASTTTDTYWYRYDS
MNRLVTDRGVLSGAAGAGGTTIVRASTSSYGSVTPSNDYVYDLTGQRTAAIRTDYMPGSY
SYYFGIYIPGYYQESREMYDYDGAGRITAIRTTQGTAAAENYDYSTGISTPPATIPAAPT
TGGFTNSTFGYDLMGRQTAQSDYQSGVTGAVYSKTATYAANGALLTEYTTTKRYDNVTYG
ASSTYTYNLSGTGEYLLGAVGTVTTYNYKNSSYQNASSTVNAYQWWDSAVQSAITYKPDT
SKSTTYTTTFTLDGQGVLTNAYIGDGRPRSIVFRTNGDGQMIRRDETDNNYNATTGGDPH
EIWYRFGGVELGYVGNNGTSQTSTPTSIGDRRTNPGTGAFRNGASYMTSTSDFAQSSEAI
NSFAQGSTAGGYTARAGDTLRSVAQQLWGDSSLWYKLAEANGIQSEMALAEGQRLNVPAG
ISRTSHNATTFRPYQAVDEVGGG
NT seq
8532 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccatggttgcgattttcacgggtgcgggatttggcttggggcgcggatcggga
tcggtccttggaggggtcggactcctcggcggagcgagtcaggggcgatctggcgacgcg
atctcggtcaatgcggcgaccggcaaccttctcatccagcagcaggacgaattcctcgtc
ggtcgcggtcccgatgcttcggtggcgcgcacctacaacagcctgacgtcgctcgcggac
gacaacaatgacaaatggcggcagagcaccgatcgccgtgtctatggcctgaccggtacg
ctcaacaccgcgggcagcaccgtcaagcgcgtctcgggcgacggcaccgaaatcgtctat
acatgggacgccacccgctcggcctatgtgaccaaggacggcggcggcgcctacgacacg
atcgtcaagagcggcaccgagtggctctggaccgacggcgacacccgcaccgtcgagcgc
tattccgatgacgcgacgggcaagatcaagagcgtggccgacaacgtgggcacggtcatg
tccttcacctacgatggcagcggccgcctgtcgcaggtcacgaccaatgacggcgcgtgg
atccgttatgactggtcgggctcgaccaacaatatctcccagatcgtcaccggctatacc
gatcttgcgacgagtaccagcaagacgctgacgcgcacgcgctacggctatgacgcatcg
aaccgcctgactagcgtgacggtcgacctctcgcccggcgacaactcgatctccgacggc
aagacctacgtcaccacctatggctatgacgcatcgaaccgggtgaacagcatcacccag
tccgacggctcggcgatgaccatcacctatgatggctcgggccgcgtcagcaccctcgtc
cagaccgtcgcgtccggcgtcacgcgcaccacgacgctcaattattattccggttactcg
accgtcaccagcccggacggacaggtgacccggctcgattatgacgcgagcggcaatctc
acgaagatcaccgccccgcccgcctatagcggcgcgacagcgcaggtctggcagttcgcc
tataatgccaatggcgatgtcactagcaccacggatgcgctgggcaaggtcacgacctat
gccaacttcacggccaacggccttgcacagacggttaccgaccgcgccggcaacgccacg
acgcgaacgttcgacgcggcgaaccatgttctaagcgagacctggaacggcatcgacgct
accggcgcgtcggtatcgcagagcgtgcgctatgtttacaacgccgcgggcgacctgcgc
tttgcgatcaccgccgagggccgcgtcaccgaatatgtccgcaacgcctatggcgcggtg
acctccgagatccactatgtcgaggcggcctatacgactaccggcacacccgccgaatcc
accatgacgacgtggaccgcgggactttccgacaagtcctgggtgcagcgggtcgactac
acttatgacgcccgcctcgggctggtgaaggccacgagctacgggatcgcgtcggccgca
ggtgctgggcagaccacccagggcatcggcgaagtcaactatgtctatgaccaggccggc
aagctcctctcgagctatgcaacggggcaaggcgccaccacctatgtctatgacggcatg
gggcggatgaccgcgagcaccgacgccgcgggcaatgcgacatcgatcgtcttcgacgac
gcgaacacgaagacgacgatcaccaattccggcggtcgcacgatcgtcgagacctacaac
aaggccggcgatctcatccagcatagcgaaagcggtacgaacgcgaccgccacgacggtt
tcctacgccgtcgacaagctcggccgcacgcgcgtgacgaccttcaccggcagcaccgac
aagatctacgatctctatgacgcggctggccgtcacgtcgcgacagtcgacgggtcgggc
cgcatcaccgaatatcgctacgacgccgacaaccggctcgtggggatgatcgcctatcgc
aacacggtcagctcgagctatttcacgacgctcgacaatccggacaacacgctcgcgctt
tccacgattcgaccggctgtgcacgccgaggatgtgtcgagctggaccatctacgacgcc
gaaggccgcgtccttcagacaatcgccggcgacggatcgacggtgatctccacctatgac
gccgcggggcggctgcaaaagaccaccagctacgtcaacaaggtcgccgccgctacggtc
gcgggctttatcgccgcggcgcccactgccgtcatcacgccgactgcgaatgccggcgat
gtttcgaagcgctatttctacgacaaggacggccgcctgatcggcacgatcgatggcgag
aaatatgtcgtccgcaacacctatgaccaggccgggcagcttgtcgcgaccacagcctat
gccaacgcgacggcggcggccagccctaccacggcgagcttcaacacgatcatcgccggc
gttccgacttcggcgcaggatcgcaccacccgctatgtctacgacggccgcggagaattg
cgctacacgatcgatgggctcgggaacgcgatccgtcatgactatgacgcggccgggctg
gagacccgcaccgtcgcctatgggaccgcgctcggaacgctgacggactatacgttcgac
aatgtgcttgcgcagctcgcgacccaggaatctggcacggccaagcgcgtgagcttcgcc
gtctacgacaccgcgggccggctcgcctacagcctcgaccagaccggagccgcatcgacg
tcgaccgacatggcggtcaccgcctatgtctatgacagcgtcggcaacgtgatccgcacc
atcgaatacgccaccgcgcggccgaccacgatactgccgaccaaggcgacgatggatagc
tggatcgcgagtgctggcaacgctgccgaccgcgtcacacgcatgtggtacacgggccgc
aatcagctggcctatcgcgtcgatgccgaaggctatgtctcgaagttcacttacgacgcc
aagggccgcgtcatcaatgagacggtctgggaaaacgcgatcgccgtcagcgacagcacg
acctatgcgcaggtcgtcgcagcggccaccggcaccagctattcgaacagccgcacctat
gacgcgctcgatcgcgtggtgcgccagtatgatttcagtggcacgaactataccgaatat
acctatctgggcgccaccaagctggtgtcgaccgtcatgcgggccgctggcgggacggcg
caggagcagtcgaccctgaccaacgtctatgacggcgctggcagggtgatcagatcgacg
gacgccaccggcgcgaccgaggcggccgcgaccaactatagctatgacggccgcggcgtg
atgacctccatggtcgatccgcgctcgaagacaaccagctacacctatgatctggacggc
cgggtcaagacgatgaccgatgccgcgagcggcgtcaccacctatgactataatgcgttc
ggccaggtctggaaggtcacggacgcacgcggcaacgccagctacagctggtacgacaag
gcaggtcgcgtcaccaccacgcgcgatgccgagaatttcctgaccacgacggcctacacc
gccttcggcgagatcgcttcggtcaagcgctgggcgacggcagcgaccggcacgcccgcg
atcggaaccgagcccgccggctcgggaacggtggcgaccacccagttcacctatgacaag
gccggccgggtgctgaccagcgtcaatgcgctgaaccagaccgagagctacgcctataac
aatttcggcgatcgcatcagcgtcaccaatcggctgagcacggtcacctcgtacaccgtc
gacaggctcggccgggtcacgcgcgagagcgtcaatgcagccaccgcgaacatcaatggc
gcgggcaccgtttcgaccggcgcgcagaatgtgaagacctatgcctacgattcacgcggc
aatgtgaagacgctggtcgagggcttcagcacgacggccggcggcgcggtcactgcgctg
cgcacgacagcctatgcctataacgcgctgagccaggtcacgaccgtcacctacaatgcg
gtgacggtgatcgcggacgatatggtgaccacctcctcggcgacgccaaccgagcaattc
acctatgacaagcgcggcaacgtcatcaagtcggtcgacaaggcgggcgcccagacgttc
agcttctatgacgatctcgaccgcaagatcgccgagatccgccagctgagcgccactcag
gcggtctatacgagctacgcctatgatgggaacggcaatctcctcacgaccaaggtctat
gagggcaacgccgcccttccctccacgccgggcggcacgcccccggcggttccatcgggc
ctctatcgccagaccgatttcgcctatgacaatctgaaccggatgaccacgagcacggtg
gtcagcaacacgggcaacgtcatcaccagcggaaactggaacggcacgagctacgcccag
gcggctggcagcctcgtgacccagtaccagtatgatgccgaaggcaatatcgtgaaggtc
accgacgccaatggcgcggtgacgtggaactggtacgacaagcttggccgcaagaccgat
cagctcgacggcgaaggctatctgacgcattggacctacgacgccgagggccatgtcctc
accgaggtccgctatgcgacgaagttcaccggcacgccggtgctcggcaccccgccgact
gtcagcacgaccggcaacgaccgcacgacggtctacacttacgatctcaatggcaaccgc
ctgaccgaaaagcggacgggcgtcaccgcctggaccgtcaacgcctcgaccggcgcgctc
accgcggccggcacggacgccatcatctcctatgcctataatgcgctgggacaggtcacc
accaagaccgtcgcgggcaccctgatcgcgacctatggctatgacggcacggggcggctg
accagtgagcagaaggcggcctattccgacgccaacggcacgtcggtgacgccaacgacc
aattacgaatatgacgcgatcggcgacctcacgcgcacgacccagctcggcgccgccggc
acctatgcggccgccgaccgggtcacgacctatcgctatgccgacggcggccgcctggtc
ggcatggtcgacgccgaaggctttgcgcacagctattattatgacgtcgcggggcggctg
aagaaggacgcctataaccgcgtcgtcaacaccaacaacacaacctcgtccaacacgacg
acgacgatcgccgaagcgcaaacgtcgacctatgacctttccggtcgcgtcctgacccaa
tcgatctacagcaccgttgccgggaccttcaagcggatcggcctgaccagctatcagtac
aacaacttcggccaggtgacccagcagggcaccgggaccaactcggcgaccgacatctcc
gcgggaacggcgctctatcaggttaccaaccagtatgacgcggccggacgcctcatcggc
acgaacagcggcgacggcgtctggaaattcttcggctacgacaaggcgggcaaccagacc
gttgccgtcacctcggccggcgcgacctttacaagcgggaccgggctggccacggccctc
tcgcaagtcgccaatgcgaacgtcaacggcacctacaccgtatacgacaagcggggccag
gcgacgcaggtagtcgaggaagggcgcgacctttccgcgacggcgaccaaccagacgctg
accaccagccggacctacaatgcgttcggcgaagtcgcgaccgagaccgacgcgcgcgga
tacgcgatcacctatacctacaacacgatgggccggatggtccggtcggaaagccccggc
gtccagatcaccaacgagaatggcggcaccaactgggtcaagccgtccgaggattattat
tacgatctcggcggccggatgatcgcgacgcgcgatgccaacggcacctatggcgcagga
acgtccggcgctcccgcgagcaagtcggccaataccggcaacctcacgacctatgcgctg
ctcgccggcaccggctatgacggcagcgagtccgtcatcgccaccgagttccactcggac
ggcggcaagaaacagatgctctacgaccgcatgggcgacgcgcgcgtggtgcgcgatgag
ctctacagcgcgagcacgccctatctgcgggtcaccgagcagaacttcaacaagctgggc
cagctcacccaggtcaagcacaaccgcctgacgaacgtggccgacgataccacgcgtctg
atcgacaactatgcctacgaccagttcggccaacgcatccagcacttcaccaacggcgtg
cagaacccgatctacggcgatcccatctggatcgacgagtataattattacacgccgatc
atcggctatgaaaatatctatgagaaggcgagctacgacgggctaggccgggtcaccgcc
cagatcgacatgtcgggctatgtgaccacgaccgcctacgcctgggacggcacgctcgcg
acctccggggtcggcaccttcggcggctttgccgaaacgaccacctacgccaacagccgg
accgcgatctccaagtcggatatcttcgaccgcgaggtgttccggcaggatctcggatcg
caccagttcgcggcgaccttcgatgcaggcggccgtcagctgaccagcggcagcaacagc
tacacctggtacaataccggcatgctggccacgagcgcgctcgtcacgggcacgctcggc
accgacgactggagccgcaagctcaccacctacggctatgacaaggtcggcaaccgcacg
agcgagaagctgatcaacgacggcagcaagaccacctggtattacagctattattactcc
tacccgatcgtcgagacgttcaactatcaatatgtgaacgagacggcgacctacgatgcg
ctgggccgcctgctgacgatgagcgaggcgggatcgaccgacacgcccgcggcgagcatc
acgaacacctatgacgcggccggaaatgtccgcagcacggtcagcacccatgccgtcctg
aacctcaacggcgcggtggcctcgaccacgacggacacctattggtatcgctatgacagc
atgaaccgcctcgtcaccgatcgcggcgtgctgtcaggggccgcgggcgcaggcgggacg
acgatcgttcgggccagcaccagcagctatggctcggtgacgccgagcaacgactatgtc
tatgacctgaccgggcagcggacggcggcgatccgcaccgactatatgcccggctcctat
tcctattatttcggcatctacatccccggctactaccaggaaagccgcgagatgtacgac
tatgacggcgcgggccggatcaccgcgatccgcacgacccagggcaccgcggcggctgag
aactacgattactccaccggcatctcgacgccgcccgccacgatccccgcggcaccgacg
acgggcgggttcaccaactcgaccttcggctacgacctgatgggccgccagacggcgcag
agcgactatcagtccggcgtgacgggcgcggtctacagcaagaccgcgacctatgcggcg
aacggcgcgctgctcaccgaatatacgaccaccaagcgctacgacaacgtgacctacggg
gcgagcagcacctacacctacaatctctccgggaccggggaatatctgctcggcgcggtg
ggcacggtcactacctacaactacaagaacagctcctaccagaacgcctcgagcacggtg
aacgcctatcaatggtgggacagcgcggtgcagagcgcgatcacctacaaacccgacacc
tcgaagagcacgacctacacgaccactttcacgctcgatggacagggcgtgctgaccaac
gcctatatcggcgacggacggccgcgcagcatcgtgttccggaccaacggcgacggccag
atgatccgccgcgacgaaaccgacaacaactacaatgcgactaccggcggcgacccgcac
gagatctggtatcgcttcggcggcgtcgagctgggctatgtcggtaacaacggcaccagc
cagacctccacgcccacgtcgatcggggatcggcgcaccaaccccggcacgggcgcgttc
cgcaacggcgcgagctacatgacgtcgacctcggacttcgcgcagagctcggaagccatc
aacagctttgcccagggctcgacggcgggcggctatacggcgcgcgccggcgatacgctg
cgctcggtcgcgcagcagctctggggcgactccagcctctggtacaagctcgccgaggcc
aacggcatccagagcgaaatggcgctcgccgagggccagcggctcaacgtccctgccggg
atcagccgcaccagccataacgcgacgacgttccggccctatcaggccgttgacgaagtc
ggcggtggctga
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integrated database retrieval system
