Rhizorhabdus wittichii DC-6: HY78_25650
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Entry
HY78_25650 CDS
T05200
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03030
DNA replication
sphd03430
Mismatch repair
sphd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HY78_25650
03430 Mismatch repair
HY78_25650
03440 Homologous recombination
HY78_25650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphd03032
]
HY78_25650
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_25650
Enzymes [BR:
sphd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HY78_25650
DNA replication proteins [BR:
sphd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HY78_25650
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HY78_25650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ARR56576
LinkDB
All DBs
Position
complement(5444013..5444990)
Genome browser
AA seq
325 aa
AA seq
DB search
MSLVGHDEQVAAFREAADSGRLHHAWLLTGPEGVGKASFALAAATRLLADAAGPRVGLPG
IETPDDHPIVNYIRAGSHPDIRILARLTKDKSEDLARSISIEQVRSLQSLFATTPSLSPR
RVVIIDAIDDLERPAANALLKNLEEPPAGTTFFLISHAPGRLLPTIRSRCRQLRFAPLGD
ADMRLALRRALPEEPGDEIDALVSVGNGSPGRALGFAGLEIAALDAAMDRLVGQGDPTNA
VRAILSKQLGTKAAQARYEAYLERVPARIAAEARGRQGPALAEAIALWEDARRIGESAVH
LSLDQSTTVFELATMLAKLAPAPAR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggtcggccatgacgagcaggtcgcggcgttccgcgaggcggcggattcgggg
cggctgcaccatgcctggctgctgaccggccccgagggcgtcggcaaggcgagcttcgcg
ctggcggcggcgacccggctgctggccgacgcggcggggccgcgggtcggcctgcccggc
atcgagacgcccgacgatcacccgatcgtcaattatatccgcgccggcagccatcccgat
atccgcatcctcgcgcggctgaccaaggacaagtcggaggatctggcgcggtcgatcagc
atcgagcaggtccgctcgctccagagcctgttcgcgaccacgcccagcctgtcgccgcgc
cgcgtggtgatcatcgatgcgatcgacgacctcgaacgccccgctgccaacgccctgctc
aagaatctggaggagccgcccgccggcaccaccttcttcctgatcagccatgcgccgggc
cggctgctgccgacgatccgctcgcgttgccgccagctccgcttcgcgccgctcggcgat
gccgacatgcggctggcgctgcgccgcgcgctgcccgaggagccgggcgacgagatcgac
gcgctggtaagcgtcggcaacggctcgccgggccgcgcgctcggcttcgccgggctcgag
atcgcggcgctcgacgcggcgatggaccggctggtggggcagggcgatccgaccaacgcg
gttcgcgccatcctgtcgaagcagctcggcaccaaggccgcgcaggcgcgctacgaagcc
tatctggagcgggtgccggcgcggatcgcggccgaggcgcgcggccgccaggggccggcg
ctggccgaggcgatcgcgctgtgggaggacgcccgccggatcggcgagagcgcggtccac
ctctcgctcgatcaatcgaccacggtgttcgagctggcgacgatgctggcgaagctggcg
ccggcgcccgctcgataa
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