Rhizorhabdus wittichii DC-6: HY78_25660
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Entry
HY78_25660 CDS
T05200
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00550
Peptidoglycan biosynthesis
sphd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HY78_25660
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphd01002
]
HY78_25660
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
HY78_25660
Enzymes [BR:
sphd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HY78_25660
Peptidases and inhibitors [BR:
sphd01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
HY78_25660
Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HY78_25660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
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Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ARR56578
LinkDB
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Position
complement(5445618..5446796)
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AA seq
392 aa
AA seq
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MTRSKIALLSAVFLMAAIPAEAAAPPFDTPAPVAFLKDLSSGAILYAKNPDLRMPPASMA
KMMTVYVAFDLIQKGELKLDAMATVRPETWKQWHGPAAGSTMFLSPGEQVSVANLLFGIV
TLSGNDACVVLAEHISGTEQAFVALMNRRAKEMGLTNSHFGTSNGWPDGGATYVTARDLA
TLAEKTIEEHPKLYKTFYSRPSFTWGKTMGGGQDITQANRDPLLGRVAGADGLKTGHTEE
AGFGFTGSAEQNGRRLVMVLSGLTSFNQRIDQSVSFMNWGFRSWQSKPVVPKGRKVQTAE
VQLGDEREVGLVAPKDLVVTVPAGLGSDLKTKVVYQGPIKAPFKKGDHIADLVVSGPDMV
PQKLPLVADQDVGTAGFFNRMMAGLRWLFGLA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcagcaagatcgccctgctttcggctgttttcctgatggcggccatcccggcc
gaggccgccgcgccgccgttcgacacgcccgcgccggtcgcgttcctcaaggatctgtcg
tcgggcgcgatcctctacgccaagaatcccgacctgcgcatgccgccggcgtcgatggcg
aagatgatgaccgtctatgtcgccttcgacctgatccagaagggcgagctcaagctcgac
gcgatggccaccgtccggcccgagacgtggaagcagtggcacggccccgcggcgggatcg
accatgttcctgtcccccggcgagcaggtgagcgtcgccaacctgctgttcggcatcgtc
accctgtccggcaacgacgcctgcgtcgtgctggccgagcatatctcgggcaccgagcag
gccttcgtcgcgctgatgaaccgccgcgccaaggagatggggctgaccaacagccatttc
ggcacgtcgaacggctggcccgacggcggcgccacctacgtcaccgcgcgcgacctcgcg
acgctcgccgagaagacgatcgaggagcatcccaagctctacaagaccttctacagccgt
cccagcttcacctggggcaagacgatgggcggcgggcaggacatcacccaggcgaaccgc
gacccgctgctcggccgcgtggcgggcgccgacggcctcaagaccggccataccgaggag
gccggcttcggcttcaccggctcggccgagcagaatggccgccgcctcgtcatggtcctg
tcgggactgacctcgttcaaccagcggatcgaccagtcggtctccttcatgaactggggc
ttccgctcctggcagtcgaagccggtcgtgccgaagggccgcaaggtgcagactgccgag
gtccagctcggcgacgagcgcgaggtcggcctggtcgcgccgaaggacctggtcgtcacc
gttccagccgggctgggttcggacctcaagaccaaggtggtctatcaggggccgatcaag
gcgccgttcaagaagggcgaccatatcgccgacctcgtcgtcagcggtcccgacatggtg
ccgcagaagctgccgctcgtcgccgaccaggacgtcggcacggccggcttcttcaaccgg
atgatggcgggcctgcgctggctgttcggcctcgcctga
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