Rhizorhabdus wittichii DC-6: HY78_26505
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Entry
HY78_26505 CDS
T05200
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00071
Fatty acid degradation
sphd00362
Benzoate degradation
sphd00650
Butanoate metabolism
sphd01100
Metabolic pathways
sphd01120
Microbial metabolism in diverse environments
sphd01200
Carbon metabolism
sphd01212
Fatty acid metabolism
Module
sphd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HY78_26505
09103 Lipid metabolism
00071 Fatty acid degradation
HY78_26505
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HY78_26505
Enzymes [BR:
sphd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HY78_26505
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
UDPG_MGDP_dh_N
Shikimate_DH
ApbA
Pyr_redox_2
F420_oxidored
TrkA_N
Methyltransf_12
2-Hacid_dh_C
AlaDh_PNT_C
MLTR_LBD
Motif
Other DBs
NCBI-ProteinID:
ARR56741
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Position
5623625..5625871
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AA seq
748 aa
AA seq
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MRRRPDKASHSRYLRPAPALCLTVRAPDSFCGGRTIASTGPDQAIMTQVNEKISTRVEGD
IGFIRSDNPPVNALGQAVRSGVVEALDRLNADPAVKAIVLHCEGRTFFAGADITEFNKPR
VPPTLQEMILAIENSPKPVVAAIHGTALGGGFETALGCPFRVAVPSARMGLPEINLGLFA
GGGGTQRLPRIIGPEKALEFVLSGKPVSAAQALALGILDAVEEGAPDAIGAAFARRVIDE
KRPAVAVSRRDDRIAATRADPSAFDALAAKLTARSKGQEAPAANVAAVRRSFTLPFDEAM
AIDAEANRALMAGSQSRALRHLFFAEREAARIPGLAKDARARDVARAAIIGAGTMGGGIA
MCFAGAGIPVVIVDTTQEALDRGMERVRANYATSVKRGSISQEQVDQRLALITPATDRAA
VADADLVIEAVFEDMAVKKEIFSDLEKRVKPGTVLASNTSALDVDEIAAALDRPEDFVGM
HFFSPANVMKLLEVVQAAKSSPEAILTAMAVGRKIGKVPVWSGNCDGFIGNRMVAKRSAQ
AERLLQRGAFPPQVDAALTKLGFPMGPLTTNDMSGLDIGYAIRKRRGTPFPIADAIVESG
QLGQKTGSGYYRYEPGDRTPRPNPDTDALIVATSAKLGIERREMSEGEMVERLLFPLINE
GARIVEAGIALRPSDVDLVWINGYGWPRHLGGPMFHADETGLAHIVARLREFAADTPDDP
SLEPAPLLVELAAKGQGFSEWQKSRAAA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaggcggccggacaaagcttcacattctcgatacctccgcccggctccggcgctt
tgcttgacagtgcgggcgccggatagcttctgcgggggcaggactatagccagcacgggg
cccgaccaagccatcatgacccaggtaaacgagaagatctccacgcgcgtcgaaggcgac
atcggtttcatccgcagcgacaacccgccggtcaacgcgctcggacaggcggtgcgcagc
ggcgtcgtcgaggcgctcgatcggctgaacgccgaccccgcggtcaaggcgatcgtgctc
cattgcgaaggccgcaccttcttcgccggcgccgacatcaccgagttcaacaagccgcgc
gtgcccccgaccctccaggagatgatcctcgcgatcgagaactcgcccaagccggtggtc
gccgcgatccacggcaccgcgctgggcggcggcttcgagaccgcgctcggctgccccttc
cgcgtcgccgtcccctcggccaggatgggcctgcccgagatcaacctgggcctgttcgcc
ggcggcggcgggacccagcggctgccgcgcatcatcggtccggagaaggcgctcgaattc
gtgctgtcgggcaagccggtgagcgccgcccaggcgctggcgctcggcatcctcgacgcg
gtcgaggagggcgcccccgatgcgatcggcgcggccttcgcccgccgcgtgatcgacgag
aagcggccggcggtggcggtcagccgccgcgacgacaggatcgccgcgacccgcgcagat
ccgagcgccttcgacgcgctcgccgcgaagctcaccgcgcgcagcaagggccaggaggcg
ccggccgccaacgtcgccgcggtccgccgctccttcaccctgcccttcgacgaggcgatg
gcgatcgacgccgaggccaatcgcgcgctgatggcgggcagccagtcgcgcgcgctccgc
cacctgttcttcgccgagcgcgaggccgcccggatccccggcctggccaaggacgccagg
gcgcgcgacgtcgccagggctgcgatcatcggcgcgggcacgatgggcggcggcatcgcg
atgtgcttcgccggcgccggcatccccgtcgtcatcgtcgacacgacgcaggaggcgctc
gatcgcggcatggagcgggtgcgcgccaattacgccacctcggtcaagcgcggctcgatc
agccaggagcaggtcgaccagcgcctggcgctgatcaccccggcgaccgaccgcgccgcc
gtcgccgacgccgacctggtgatcgaggcggtgttcgaggacatggcggtcaagaaggag
atattctccgacctggagaagcgggtgaagccgggcacggtgctcgcctcgaacacctcg
gcgctcgacgtcgacgagatcgccgcggcgctcgaccggcccgaggatttcgtcggcatg
cacttcttctcgccggccaatgtgatgaagctgctggaggtggtgcaggcggcgaagagc
agcccggaggcgatcctcaccgcgatggcggtcggccgcaagatcggcaaggtgccggtc
tggtcaggcaattgcgacggcttcatcggcaaccggatggtcgccaagcgctccgcccag
gccgaacggctgctccagcgcggcgccttcccgccgcaggtcgacgcggcgctcaccaag
ctcggcttcccgatggggccgctgaccaccaacgacatgtcgggcctcgacatcggctat
gcgatccgcaagcggcgcggcacgcccttcccgatcgccgacgcgatcgtcgagagcggg
cagctcggccagaagaccggatcgggctattatcgctacgagccgggcgaccgcaccccc
cgccccaaccccgataccgacgcgctgatcgtcgccacctcggcgaagctcggcatcgag
cggcgcgagatgtcggagggcgagatggtcgaacggctgctgttcccgctgatcaacgag
ggcgcgcggatcgtcgaggcgggcatcgcgctgcggccgtccgacgtcgatctggtctgg
atcaacggctatggctggccgcgccacctgggcgggccgatgttccacgccgacgagacc
gggctggcgcacatcgtcgcccgcctgcgggagttcgccgccgacacgcccgacgatccc
tcgctcgaacccgcgccgctgctggtcgagctggccgcgaaaggacagggtttttccgaa
tggcagaagagccgcgccgcggcctga
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