Rhizorhabdus wittichii DC-6: HY78_26820
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Entry
HY78_26820 CDS
T05200
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HY78_26820
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sphd01001
]
HY78_26820
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sphd02022
]
HY78_26820
Enzymes [BR:
sphd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
HY78_26820
Protein kinases [BR:
sphd01001
]
Histidine kinases
LuxR family [OT]
HY78_26820
Two-component system [BR:
sphd02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
HY78_26820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
HATPase_c
PAS_4
PAS_8
HisKA
Diguanyl_cycl_sensor
PAS_3
PAS_10
HATPase_c_5
MLTR_LBD
HATPase_c_2
PAS_7
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ARR56796
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Position
complement(5695466..5697361)
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AA seq
631 aa
AA seq
DB search
MVGAVRIRGKMSMGRTIPAVLLALAAVGVVALVQVELAMSTGAAGDYLPLIVAMLVAGLT
GGSAAAAIAAVAATGFVVLQGKGAPLDHARAADLAGFLLVAAVIVGLSRSVERTRRRLAQ
DKLEGYRRAVAASETADELNLLIDGATDHAIYMLDPDGRVTIWNKGAERLMGWSEAEAVG
QPIAFFYPPEAVAAGKPAADLDRARQEGRFEEEEWRIRKDGSQFLAHMSLTALYDEHRQL
RGFGKVIRDVTEQRAVERQLRSSAGQMRSILSTVPDAMVVIDAHGLIISFSAAAERLFGY
AEAEMLGSNVSRLMPSPYRERHDSYLDRYARTGERHIIGIGRKVIGQKRDGSTFPMELSV
GEAEAGGEPVFTGFIRDLSEAVRMEERIEDLRSDLIHVARVSAMGTMASTLAHELNQPIT
AVVNYVETVRDMLVEPKAGDLPVIREALAESASEAMRAGQIVRRLREYVARGDVEKTVED
LPALIDVAAKLGLIGAQERGVELRFDVDPLAGPVLVDRVQIQQVLINLMRNAIEAMADSP
VRLLRIETRREGDGMVRVTVADSGHGVAPEIEAGLFSAFNSTKAGGMGLGLSICRTIVEA
NGGRITYERDPGGGSRFHFTLLGFTPEDEHG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgccgtgcggatccgaggaaagatgtcgatgggcaggaccatcccggccgtt
ctcctcgccctggcggcggtgggcgtcgtcgccctggtccaggtcgagctggcgatgtcg
accggcgcggcgggcgactatctgccgctgatcgtcgcgatgctggtcgccggcctgacc
gggggcagcgccgcggcggcgatcgcggcggtcgcggcgaccggcttcgtcgtgctgcag
gggaagggcgcgccgctcgatcatgcgcgcgccgccgacctcgccggcttcctcctggtc
gcggcggtgatcgtcgggctgtcgcgctcggtcgagcggacgcggcgtcggctcgcccag
gacaagctggagggctatcgccgcgcggtcgcggcgagcgagaccgccgacgagctcaac
ctgctgatcgacggcgcgacggaccatgcgatctacatgctcgaccccgacggccgggtg
acgatctggaacaagggcgccgagcggctgatgggctggagcgaggccgaggcggtcggg
caaccgatcgccttcttctatccgcccgaggcggtggcggcgggcaagccggcggcggac
ctcgaccgcgcccggcaggaggggcgcttcgaggaggaggaatggcgcatccgcaaggac
ggatcgcaatttctggcgcacatgtcgctgaccgcgctctatgacgagcatcgccagctg
cgcggcttcggcaaggtgatccgcgacgtgaccgagcagcgcgcggtcgagcggcagctc
cgctccagcgccgggcagatgcgatcgatcctctcgaccgttcccgatgcgatggtggtg
atcgacgcgcacggcctgatcatctcgttcagcgccgccgccgagcggctgttcggctat
gccgaggcggagatgctgggcagcaacgtcagccggctgatgccgtcgccctatcgcgag
cggcacgattcctatctcgaccgctatgcgcgcaccggcgagcgccacatcatcggcatc
ggccgcaaggtgatcggccagaagcgcgacggatcgaccttcccgatggaattgtcggtc
ggcgaggcggaggccgggggcgagccggtcttcaccggcttcatccgcgacctcagcgag
gcggtgcggatggaggagcggatcgaggacctgcggtcggacctgatccatgtcgcgcgg
gtcagcgcgatggggacgatggcgtcgacgctggcgcatgagctcaaccagccgatcacc
gcggtggtcaactatgtcgagacggtccgcgacatgctcgtggagccgaaggccggggac
ctgcccgtcatccgcgaggcgctggcggaaagcgcgagcgaggcgatgcgcgccgggcag
atcgtccggcggctgcgcgaatatgtcgcccggggcgatgtcgagaagaccgtcgaggac
ctgccggcgctgatcgacgtcgccgccaagctgggcctgatcggcgcgcaggaacgcggc
gtcgagctgcgcttcgacgtcgatccgctggccgggccggtgctggtcgaccgggtccag
atccagcaggtgctgatcaacctgatgcgcaacgcgatcgaggcgatggccgacagcccg
gtccgcctgctgcggatcgagacgcgcagggagggcgacggcatggtgcgcgtgaccgtc
gccgacagcggccatggcgtcgcgccggagatcgaggcgggcctgttcagcgccttcaac
agcaccaaggcaggcggaatggggctgggcctgtcgatctgccggacgatcgtcgaggcc
aatggcggccggatcacctatgaacgcgatcccggcggcggatcgcgctttcacttcacc
ctgttgggcttcacgccggaggacgagcatggatga
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