KEGG   Rhizorhabdus wittichii DC-6: HY78_26905
Entry
HY78_26905        CDS       T05200                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HY78_26905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sphd02022]
    HY78_26905
Two-component system [BR:sphd02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   HY78_26905
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 FleQ AAA nSTAND3 bpMoxR AAA_16
Other DBs
NCBI-ProteinID: ARR56809
LinkDB
Position
complement(5718448..5719836)
AA seq 462 aa
MALEILIVDDEADIRDLVAGVLEDEGYAARTAADSDSALAAIDERRPSLVLLDVWLQGSR
LDGLDLLDEIKRRDPSLPVLMISGHGNLDTAVTAIRRGATDFIEKPFEAEHLLLLVDRAT
ETDRLRRENATLKAQIGQEEELTGNSGAINGIRATLKRVAATGSRVLISGPAGVGKEVAA
RLLHVWSHRAQAPFIVVSAARMEPERVEEELFGVEENGELLRPGLLEQAHGGTLFLDEIA
DMPLTTQAKILRVLTEQAFNRVGGQRIVKVDVRVVSATSRNLAEEITAGRFREDLYYRLN
VVPVNIPPLAERREDIPALVEHFLARFASERRVPTPVVTDDAVGALQTYDWPGNVRQLRN
IVERTIILAPGERIGQIELDMLPPEILSDQARLAPGEAARSIMGTPLREARETFEREYLR
VQIRRFSGNISKTASFIGMERSALHRKLKTLGLVDPREEGEE
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcgctcgaaatcctgattgtcgatgacgaggcggatatccgcgacctggtggcgggc
gtgctggaggatgagggctatgccgcccgcaccgccgccgacagcgactcggcgctcgcg
gcgatcgacgagcggcggccgtcgctcgtgctgctcgacgtctggctgcagggatcgcgc
ctcgacgggctcgacctgctcgacgagatcaagcgccgcgacccgagcctgccggtgctg
atgatctcgggccacggcaatctcgacaccgcggtgacggcgatccgccgcggcgcgacc
gacttcatcgagaagccgttcgaggccgagcacctgctgctgctggtcgaccgcgcgacc
gagaccgaccggctgcgccgcgagaatgcgacgctcaaggcgcagatcggccaggaggag
gaactcaccggcaattcgggcgcgatcaacggcatccgcgccacgctgaaacgcgtcgcc
gcgaccggcagccgcgtgctgatcagcggcccggccggcgtcggcaaggaggtggcggcg
cgcctcctccatgtctggagccaccgcgcgcaggcgcccttcatcgtcgtcagcgcggcg
cggatggagcccgagcgggtcgaggaggagctgttcggggtcgaggagaatggcgagctg
cttcgccccggcctgctcgaacaggcgcatggcggcacgttgttcctcgacgagatcgcc
gacatgccgctcaccacccaggcgaagatattgcgggtgctgactgaacaggcgttcaac
cgggtcggcgggcagcgcatcgtcaaggtcgacgtccgcgtcgtctcggccacctcgcgc
aacctggccgaggagatcaccgccgggcgtttccgcgaggacctctattatcgactcaac
gtcgtgccggtgaacatcccgccgctggccgagcggcgcgaggacatcccggcgctggtc
gaacatttcctggcgcgcttcgcctccgaacggcgggtgccgactccggtcgtcaccgac
gatgcggtcggcgcgctgcaaacctatgactggccgggcaatgtccgtcagctccgcaat
atcgtcgagcggacgatcatcctcgcgcccggcgagcggatcggccagatcgaactcgac
atgctcccgcccgagatattgagcgaccaggcgcggctcgcgccgggcgaggcggcccga
tcgatcatggggacgccgctgcgcgaggcgcgcgagacgttcgagcgcgaatatctgcgc
gtccagatccgccgtttctcgggcaatatctcgaagacggcctcgttcatcggcatggag
cgctcggcgctccaccgcaagctcaagacgctgggactggtcgatccgcgggaggagggg
gaggagtaa

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