Rhizorhabdus wittichii DC-6: HY78_27460
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Entry
HY78_27460 CDS
T05200
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphd03000
]
HY78_27460
03036 Chromosome and associated proteins [BR:
sphd03036
]
HY78_27460
Transcription factors [BR:
sphd03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
HY78_27460
Chromosome and associated proteins [BR:
sphd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HY78_27460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
NirdL-like_HTH
HTH_23
HTH_50
HTH_CodY
HTH_20
HTH_11
HTH_Crp_2
HTH_IclR
HTH_5
HTH_Tnp_ISL3
HTH_28
PF0610-like_N
HTH_38
HTH_Cmi2_C
LexA_DNA_bind
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ARR56912
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Position
5833800..5834378
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AA seq
192 aa
AA seq
DB search
MFGDFCHWVTRSGKDSDRMTDSIDLDDFDRRIIAIVRRDNQQPARTIADQVGLSESAVLR
RLRRLRSGGIIVADVSLIDPSRLAPAITIHVLVELAQSGLKVEQLFARTLESRPEVIGAW
NVTGRTDFLVTVSVPSIEAYQRFADEVLASDDNIRGFETLVSLREIVRFDPLRAGDPLPI
VMTPKEGHPPAR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgatttctgtcactgggtgacgagatcaggcaaagatagcgatcggatgacg
gattccatcgacctcgacgatttcgaccggcggatcatcgcgatcgtccgccgcgacaac
cagcagccggcgcgcacgatcgccgatcaggtgggcctgtcggaaagcgcggtgctccgc
cggctgcggcgattgcggagcggcggcatcatcgtcgccgacgtctcgctgatcgatccg
tcgcggctcgcgccggcgatcaccatccatgtgctggtcgagctcgcccagagcggcctc
aaggtcgaacagctcttcgcgcggacgctggagagccggcccgaggtgatcggggcgtgg
aacgtcaccgggcgcaccgacttcctggtgacggtcagcgtgccgtcgatcgaggcctat
cagcgcttcgccgacgaggtgctggcctccgacgacaatatccgcggcttcgagacgctg
gtcagcctgcgcgagatcgtccgcttcgatccgctgcgggcaggcgatccccttcccatt
gtcatgactcccaaagaggggcatcctcccgcgcgctga
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