Rhizorhabdus wittichii DC-6: HY78_27655
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Entry
HY78_27655 CDS
T05200
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03030
DNA replication
sphd03430
Mismatch repair
sphd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HY78_27655
03430 Mismatch repair
HY78_27655
03440 Homologous recombination
HY78_27655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphd03032
]
HY78_27655
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_27655
Enzymes [BR:
sphd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HY78_27655
DNA replication proteins [BR:
sphd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HY78_27655
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HY78_27655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_30
AAA_14
AAA_24
AAA_19
DUF815
AAA_assoc_2
AAA_18
BKACE
Glyco_tranf_2_5
PIF1
Motif
Other DBs
NCBI-ProteinID:
ARR56949
LinkDB
All DBs
Position
complement(5867582..5869330)
Genome browser
AA seq
582 aa
AA seq
DB search
MSESSTPYRVLARKYRPQNFNELIGQDAMVTTLANAIRRGRLAHAFLLTGVRGVGKTSTA
RLIAKALNCIGPDGQGGPTIDPCGVCEPCVAIAEGRHIDVVEMDAASHTSIDDVREIIEA
VRYASVSARYKIYIIDEVHMLSKSAFNGLLKTLEEPPAHVKFLFATTEVNKVPITVLSRC
QRFDLRRITADKLAAHFTNVVAAEGVEADPEALALIARAAEGSARDGLSILDQAIAHGSG
RVEAQQVRDMLGLSDRGAVRRLFGEMLKGDAAAVLASIRGQYDLGVEPVAMLHGLLETCH
AITRAKVAGTDDPALSAEEREAYGDWAGKLGFATLHRLWQLLLKGHGEVQTAAMPIEAAE
MALLRVVHASQLPDPGELARRLASGDLNLPVQPAPAQPPAAEPQGALMAAPAPIAAPAPA
PAPIETPPPLAAVPAPAPVVAPVPVAIPEPEPEPAPPSLPATGEAIHALLLPENALLAQL
FHDYAAIVRLQGEELLIARHQRLPQNFAGDVANILKRSTGRTWSVAMVDEAGAPSLLARI
RAEEDAARDAILESPLVKAALEAFPDAELIDYSAPEKRSLAS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatcctcgacaccctatcgcgtcctcgcgcgcaaatatcggccgcagaatttc
aacgagctgatcggccaggacgcgatggtgacgaccctcgccaacgcgatccggcgcggc
cggctggcgcatgccttcctgctgaccggcgtgcgcggcgtcggcaagacctcgaccgcg
cggctgatcgccaaggcgctcaactgcatcgggccggacgggcagggcgggccgacgatc
gatccttgcggcgtctgcgagccctgcgtcgcgatcgccgaggggcggcatatcgacgtg
gtcgagatggacgccgccagccacaccagcatcgacgacgtccgcgagatcatcgaggcg
gtgcgctatgcgtcggtgtcggcgcgctacaagatctacatcatcgacgaagtccacatg
ctgtcgaagtcggccttcaacggcctgctcaagacgctggaggagccgccggcgcatgtg
aaattcctgttcgccacgaccgaggtgaacaaggttccgatcaccgtcctgtcgcgctgc
cagcgcttcgacctgcggcgcatcaccgccgacaagctggcggcgcacttcaccaacgtc
gtcgcggccgagggcgtcgaggccgatcccgaggcgctggcgctgatcgcgcgggcggcc
gaaggctcggcgcgcgacggcttgtcgatcctcgaccaggcgatcgcgcacggatcgggc
cgggtcgaggcgcagcaggttcgcgacatgctgggcctgtccgatcgcggcgcggtccgc
cgcctgttcggcgagatgctgaagggcgacgcggcggcggtgctggcgagcatccggggg
caatatgacctcggcgtcgagccggtggcgatgctgcacgggctgctcgagacctgccat
gcgatcacccgcgccaaggtggccgggaccgacgatcccgcgctgtcggccgaggagcgc
gaggcctatggcgactgggccggcaagctcggcttcgcgacgctccaccggctgtggcag
ctcctgctcaagggccatggcgaggtccagaccgccgccatgccgatcgaggcggccgag
atggcgctgctccgcgtcgtccatgccagccagcttcccgatccgggcgagttggcgcgc
cggctcgcctcgggcgacctgaacctgcccgtccagcccgcgcccgcccagccgccggcg
gccgagccgcagggcgcgctgatggccgcgccggcgcccattgccgctcctgcgcctgcg
cccgccccgatcgagacgccgccgccgctggccgccgtgccggccccggccccggtcgtc
gctccggttccggtcgcgatccccgagcccgagccggaacccgcgccgccgtcgctgccc
gcgaccggcgaggcgatccatgcgctgctgctgccggaaaacgcgctgctcgcgcagctc
ttccacgattatgcggcgatcgtccggctgcagggcgaggaactattgatcgcgcgccac
cagcggctgccgcagaatttcgccggcgacgtcgccaatatcctcaagcgatccaccggc
cggacctggtcggtcgctatggtcgacgaggcgggcgcgccctcgctgctcgcccggatc
cgcgccgaagaggacgcggcgcgcgacgccattctcgaatccccgctggtcaaggccgct
ctggaagcctttccggatgccgagctgatcgactacagcgcccctgaaaaacggagtctc
gcatcatga
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