Rhizorhabdus wittichii DC-6: HY78_28145
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Entry
HY78_28145 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_28145
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_28145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ARR57410
LinkDB
All DBs
Position
pDC01:complement(43873..46575)
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AA seq
900 aa
AA seq
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MTIRMALLGSAAIVAGYAAPALAQADPTPQPKAQVLGDDSDIVVTGSRIRRQDLAGVGPA
TVVTAEQIQNTGIVNIETALQRLPANAGFAGNQTSAYWTNNGYGTAQVNLRGLGIKRTLV
LLNGRRLVAGGTGANSSPDLNMIPVVALARTDVLKDGASAIYGADAMAGVVNLVTRTDYE
GLGLSVRQGITERGDGSDLTADLLWGIRNDRGGFMAAVTYQKTSAVNMASRAPCSLAETT
PGSLSCVNSASTIGGRAVLPNGQQINFNQVPGGNGNFYEPYSPAKHNFNSNPFLNAVSPV
ERVSTAFFADYALTDGIQAFGEFLYTFRKSNQIATPGTLRNLSIPASNPTNPTGQNLVLA
QRRLAEPGARHFFQETDTWQGTFGLRGKLANDWAWEVAGSFGRNTAVDGSTNIANLERVA
NTLDRSKCSSTAGAAIPCGDYLGFGDLTPQVLDYILFTSRDRGGNELGTVTADLNGDLFS
LPAGAVSFATGVVYRREKGWRDPDPLTVLGVANVNQQDPISGSSTAKEAYLELSVPVLAN
TAFAKALTLDGAVRYSDYNLFGSDWNYKLSADWVVNDSIRLRGTYGTGFRIPNVPELFGG
VSEGNLTTTDPCSRYTSSGNVTLIANCQASGVPANYTQLGTTILTTVGGNQSLRPESSTT
WTVGTVISPRGIIPGLSLTADWFDIKIKDAIRAIPGSTKLAVCYASQNLSHPFCSDFTRS
ALTGEVTYLSAQPINTGREEMNGLDLGLVYSGAVGEVKISLDLNMTYLNKYVVNPFPGGA
PIYFDGFIGGGNGGYPKWRGYGVLTAEKDGISATWSTQWIGKATDFNASAGDIGYRTPNV
FYHNLQLAFAIDEKTRFQIGADNLFDRKAPYIQSFTDANTDTMTYDLLGRRFYAGFRTAF
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaggatggccctgctcggcagcgccgccatcgtcgcgggctacgccgcgccg
gctctcgctcaggccgatccgacaccgcagccaaaagcacaagtcctgggggatgacagc
gacatcgtcgttaccggctcacgaatccgtcggcaggatctggccggggttggaccggcc
accgtggtcaccgccgagcagatccaaaataccggcatcgtcaatatcgaaaccgccttg
cagcgtttgccggccaatgccggcttcgcgggcaaccagacatcggcctactggaccaac
aacggttatggcactgctcaggtcaatctgcgcggcctcggcatcaagcgcacactcgtg
ctcctcaacggccgacgcctcgtcgcgggcggcaccggcgccaattcctcacccgatctc
aacatgatcccggtcgtggcgctggcacgcaccgatgtcctcaaggatggcgcgtccgct
atctacggggccgatgccatggccggcgtggtcaaccttgtcacgcgcaccgattatgaa
ggcctgggtctcagcgtccgacaaggcattaccgagcgcggcgacggctccgatctcacc
gcggacctactttggggcattcgcaacgatcgtggcgggttcatggcagcagtcacctac
cagaagaccagcgccgtcaacatggcctcgcgtgcgccctgctcgctcgctgaaacgacg
ccgggctcgctgagctgcgtcaacagcgcctcgacgatcggcggacgcgcggtgctgccc
aacggccaacagatcaacttcaaccaggtacccggagggaacgggaacttctacgagcct
tacagtcccgccaagcacaacttcaactcgaacccgtttctcaatgcggtcagcccagtc
gagcgcgtcagcacggccttcttcgcggactatgcgctgaccgacggtatccaggcgttc
ggcgagttcctctatacgttccgcaagtcgaatcagatcgcgacacccggcacgctgcgc
aatctctcgataccagccagcaatccgaccaatccgaccggccagaacctggtcctggcc
cagcgccgcctcgccgaacccggcgcgcgccacttcttccaggagaccgatacctggcaa
ggcaccttcgggctgcgcggcaagctggcgaacgactgggcctgggaagtcgcgggcagc
ttcgggcgtaacacggccgtcgacggctcgaccaacatcgccaatctcgagcgcgtcgcg
aacacgctcgacaggagcaaatgctccagcacggcgggcgcggccatcccctgcggtgac
tatcttgggttcggagacctgacacctcaggttctggattatattctgttcacctcgcgc
gatcgcggaggcaacgaactcggcacggtcacggctgacctcaacggcgatctcttctcc
cttccagccggcgcggtgtccttcgccaccggcgtggtctatcggcgcgaaaaaggctgg
cgcgatcccgacccgttgacggtgctcggcgtggcgaacgtcaatcagcaggatcctatt
tcgggctcgagcaccgccaaggaagcctatctcgagctatcggtgccggtgcttgccaac
acagctttcgccaaggcgctcacgctcgatggcgcagtccgctactcagactataatctc
ttcgggagcgactggaattacaagctcagtgccgactgggtagtcaatgacagcatccgt
ctgcgcggcacttatgggacgggctttcgcattcccaacgtgccggagcttttcggcggc
gtctcggaaggcaatctgaccacgaccgatccctgctcgcgctacacctccagcggcaac
gtgaccttgatcgccaattgtcaggcgtccggtgtgccggccaactatacgcagctcggc
accacgatcctcaccacagtgggcggtaaccagagccttcggcccgaaagctccacgacc
tggaccgttggtacggtgatatcgccgcgcggcatcatcccagggttgtcgctgacggca
gactggttcgacatcaagatcaaggacgcgatccgggccattcccggctcgaccaagctc
gcagtctgctatgcgagccagaacctgtcgcacccgttctgcagcgactttacgcgcagc
gcgctgaccggcgaggtcacttacctctccgcccagcccatcaacaccggccgcgaggag
atgaatggtctcgatctgggtctggtgtacagtggtgcggtgggcgaggtgaagatctcc
ttggatctcaacatgacctatctcaacaaatatgtcgtaaaccccttccccggcggcgcg
ccgatctatttcgacgggtttatcgggggcggcaatggcggctatccgaaatggcgtggt
tatggcgtgctgacggcggaaaaggacggcatcagcgcgacctggtcgacacaatggatc
ggcaaggcgaccgacttcaacgcatcggccggcgacatcggctaccgcacgccgaacgtc
ttctaccacaatcttcagcttgccttcgcgatcgacgagaagacacgtttccagatcggg
gccgataatctgttcgaccgcaaggcgccctatatccagagcttcaccgatgccaacacc
gacacgatgacctatgatctgctcggacggcgcttctacgccggcttccgaaccgcgttc
tga
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