KEGG   Rhizorhabdus wittichii DC-6: HY78_28425
Entry
HY78_28425        CDS       T05200                                 
Name
(GenBank) conjugal transfer protein
  KO
K03194  type IV secretion system protein VirB1
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HY78_28425
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_28425
Secretion system [BR:sphd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HY78_28425
SSDB
Motif
Pfam: SLT DUF4148
Other DBs
NCBI-ProteinID: ARR57458
LinkDB
Position
pDC01:97879..98547
AA seq 222 aa
MILDVASLVALAGSCAPSVAPETLISIVHTESRFNTLAIGVNSPGVRKPAPATRAQAIAV
ARRLIRQGYNIDLGLGQINSANLGWLGLSVEDAFEPCRNLAAAARVLTTNYQSVAHSAQS
SDHAIATALSLYNTGDRRRGFRNGYVARVYASASTIIPLIRGRPTAPVLPARVQLADAAI
AKPQPYGLAATQAAGWNTAADARQASLMVFGDGTTSQKGQHP
NT seq 669 nt   +upstreamnt  +downstreamnt
atgatcctcgacgtcgccagtcttgtcgcccttgcaggctcatgcgcaccgagcgtggcg
cctgagacgctgatctcgatcgttcacacggaaagccggttcaacacgcttgcgatcggg
gttaacagtccgggtgtgcgcaagccggcgccggcgacgagagcacaggcgattgccgta
gcgcgtcgcctcattcgccaaggctacaacatcgacttgggcttggggcagatcaacagc
gccaacctcggatggctcggtctttcggtggaggatgccttcgagccgtgccgcaacctt
gccgccgccgcgcgggtgttgacgaccaactatcagtcggtggcgcactccgcccagagt
tcggaccatgcgatcgcaacagcgctctcgctctacaataccggcgatcggcggcgcggc
tttcgcaatggttatgtcgcccgggtctatgccagcgcgtcgaccatcatccccctgatc
cgcggcaggccaacagcgccggtcctgccggcgcgcgtccagcttgccgacgcggcgatc
gccaaaccgcaaccctatgggctcgcggcgacgcaggcggccggttggaacaccgccgcc
gatgcccggcaagcctcgctcatggtcttcggggacgggacaacttctcagaaaggacag
catccatga

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