KEGG   Rhizorhabdus wittichii DC-6: HY78_28440
Entry
HY78_28440        CDS       T05200                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HY78_28440
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_28440
Enzymes [BR:sphd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HY78_28440
Secretion system [BR:sphd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HY78_28440
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_22 FtsK_SpoIIIE AAA_7 AAA_16 ABC_tran TrwB_AAD_bind ATPase nSTAND3 AAA_29
Other DBs
NCBI-ProteinID: ARR57461
LinkDB
Position
pDC01:99222..101633
AA seq 803 aa
MASAAAQLPPRKTPWRVLAREAEPGRYLPYARHVTPDVIALDSGDLMMMFRLEGLAFETA
DPIHLNDWHEKLNGTWRNIADDRLAIWTHIVRSAVGDYPEGQFRSAFAAELDSKYRARVT
AKRMFVNEHYLTLLMRPAVGSADRTGLLLKRISKARAAEQEVDPDELARFEEKARDIEKL
LRRCSPTRLALYEHNGLIFSAPLEVLEQVMMGARSRVPLVRGHLGSALYGERVIFGRETV
EIRAHDASRWQGIFGIREYPALTRPGQMNALLGQDFAFVVSQSFTFMGKARAAERLRRRQ
NQMASTEDAAASQALDLADAADDLQSNRFVLGEHHFSLAVFAENQRRLADNLSAARAALA
DAGLVAAREGPALEAAFWAQLPGNFAWRARPAAITSRNFAALAPFHTYPAGRAKGNHWGP
AIAMMKTAAQSPYYFNFHVGDLGHTLIIGPSGAGKTVVQNFLMSQLEKTGAQQIFIDKDR
GAEIYVRSAGGIYLTLKNGEPTGFAPLQALDYGPRNLVFLGRLIRQLVTPVGDQLGVTQE
RMIDEGLASLGRLAPEDRSILALRQLLGQRDPEGIGARLEKWARGGSLGWVFDNEIDALS
LEAPFVGFDMTDFLDNPEVRTPLMMYMFHRIDGLLDGRRLVIDIDEFWKALGDDAFRAFA
QDGLKTYRKQNAFLVFGTQSPADALRSDISHSIMEQVATKILLPNPYGRETDYVDGLGLT
QAEFKLIRHDLNPESRRFLVKQGHDSIVVELDLGGLSDELAVLSGTTETVTLLDAIRAEV
GDDPENWLPLFHQQRRSPSSRKG
NT seq 2412 nt   +upstreamnt  +downstreamnt
gtggctagcgccgccgcccagctgccgccacgcaagaccccctggcgggttctggcccga
gaggcggagcccgggcgctatctgccctatgcccgccatgtgacgcccgatgtgattgcg
ctcgatagcggcgatctcatgatgatgttccgtctcgaagggctggctttcgagacggct
gatccgatccacctcaacgattggcacgagaagctcaacggcacttggcgcaacatcgcc
gacgatcggcttgcgatctggacccacatcgtccgctcagccgtaggggattatcccgaa
gggcagttccgctcggcgttcgccgccgagctcgacagcaaatatcgggcgcgcgtcacc
gccaagcggatgttcgtcaatgagcattatctaacgcttctcatgcgtccggccgtcgga
tcggccgaccggaccgggttgcttctcaagcggatttcgaaagccagggcggcggagcag
gaagtcgatcccgacgaactggcgcgcttcgaggagaaggcgcgcgacatcgagaagctg
ctccgccgctgcagcccgacgcgcctcgccctctacgagcataatggcctgatcttctcc
gccccgcttgaggtgctcgagcaagtgatgatgggcgcgcgatccagggttccgctcgtc
cgcggtcatctgggatcggcgctttatggcgagcgcgtgattttcggacgcgagacggtc
gagatccgtgcccatgacgcaagtcgctggcagggtatcttcgggatcagagagtatccc
gcgctgacgcgcccgggccagatgaatgccttgctcggccaggatttcgccttcgtcgtc
tcgcaatccttcaccttcatgggcaaggcgcgggcagccgaacgtctgcgccgccggcag
aaccagatggcctcaaccgaggatgcggccgcgagccaggcgctcgatcttgccgatgcc
gccgacgatttgcaaagcaaccgcttcgttcttggtgagcatcatttctcgctggccgta
ttcgccgagaaccagaggcggcttgccgataatctctcggccgcgcgcgctgcactggcc
gatgccggcctggtggcggcacgcgaaggaccagcgctcgaagcggcgttctgggcgcag
ctgcccggaaattttgcttggcgggcgcggccggcggcgatcacctcgcgcaattttgct
gccttggcgccgttccatacctatcccgcaggccgggccaaggggaaccattgggggcct
gcgatcgctatgatgaagacggcggcgcaatcgccctattatttcaacttccatgtcggc
gacttgggccacacactgattattggtccttccggcgcgggcaagaccgtcgtccagaat
tttctgatgtcgcagcttgagaagacgggcgcgcagcagatcttcatcgataaggaccgc
ggcgcggagatttatgtccggtctgcgggcgggatctatctgacgctgaagaatggggag
cctacgggtttcgctcctctgcaggcactcgactatggtccgcgcaatcttgtcttcctg
gggcgcttgatccgccagctggtgacgccggtcggagatcagctcggggtcacgcaggaa
cgcatgatcgacgaggggctggcctcgctcggacgcctcgcgcccgaggaccgctccatt
ctcgcgcttcgccagttgctcggtcagcgcgacccggaaggcatcggtgcccggctggag
aaatgggcgcggggcggttcgctcggctgggtgttcgacaatgagatcgacgctttgtcg
ctggaggcgccgttcgtcggtttcgacatgaccgattttctcgacaaccccgaagttcgc
acgccgctcatgatgtacatgttccaccggatcgacggtctcctcgacggccggcggctt
gtgatcgacatcgacgaattctggaaagccttgggggacgatgcgttccgcgcctttgcg
caggacggcctcaagacctaccgcaagcagaatgcctttcttgtcttcggcacgcaaagc
cctgcggatgcgctgcgttcggacatttcgcacagcatcatggagcaggttgcgaccaag
atactgcttcccaacccctacggccgcgaaacggactatgtcgatggactgggtctgacc
caggcggaattcaagctcatccggcatgatctgaatccggaatcccgccgattcctggtc
aagcaaggccatgactcgatcgtcgtcgagctcgatcttggcggtctctccgacgagctg
gcagttctctcgggcaccacggaaaccgtcacgctgctcgatgccatccgcgccgaggtc
ggcgacgatcccgaaaactggctgcctctctttcaccagcagcgtcggtctccatcgagc
aggaaaggatga

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