KEGG   Rhizorhabdus wittichii DC-6: HY78_28445
Entry
HY78_28445        CDS       T05200                                 
Name
(GenBank) type VI secretion protein
  KO
K03200  type IV secretion system protein VirB5
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HY78_28445
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_28445
Secretion system [BR:sphd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HY78_28445
SSDB
Motif
Pfam: T4SS M_smaller_dom
Other DBs
NCBI-ProteinID: ARR57462
LinkDB
Position
pDC01:101637..102356
AA seq 239 aa
MRKDRFAAIGAIILGTADPAAAQGIPVYDSSGYLQALATVKNTLSMIEQGKEQIAEAKQL
YGSFNQVTDVNGIAPSLSTDAMRHLLPREARDLGRLMSSDNASLGSLGSAATRIRDANRI
ALPDLRPGASAYERASRDTLLRNGDLAARDAAIAESAYGVSAQRTAGLEELRTSLDTASD
AKQVMDIQARVGVENAHIQNDALQLQALRMRQDAEDRLRSQRQGEEALAKLEQSLGETR
NT seq 720 nt   +upstreamnt  +downstreamnt
atgcgtaaagacagattcgcagcgatcggtgcgattatcctgggaacggcagatccggcc
gccgcccaaggcataccggtctatgacagctccggctatttgcaggcgcttgccacggtc
aagaacaccctgtcgatgatcgagcagggcaaggagcagatcgccgaggccaagcagctc
tacggtagcttcaatcaggtcaccgacgtcaacggcattgccccgtcgctttccaccgac
gcgatgcgccatcttctgccgcgcgaggcccgcgacctcggcaggttgatgtcgtcggac
aatgccagcctgggatcgcttggcagtgccgcgacccgaattcgcgatgccaaccgcatt
gcgctgccggacctgcggccaggcgcctcagcctatgagcgggcgtcgcgcgacactctg
ttgcgaaatggcgatctagccgcccgcgatgccgcgatcgcggagtcggcttatggcgtc
tcggcccaacgcacagcgggcttggaagaactgcgcacctcgctcgatacggcttcggac
gcgaaacaggtcatggacatccaggcaagggtaggggtcgaaaacgcccacatccagaat
gatgccttgcagttgcaggcgctccgcatgcggcaggatgcggaggatcggttacgttcg
cagcgccaaggagaagaagctctggccaagcttgaacaatcgttgggcgagacccggtga

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