Rhizorhabdus wittichii DC-6: HY78_29505
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Entry
HY78_29505 CDS
T05200
Name
(GenBank) hypothetical protein
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphd03000
]
HY78_29505
Transcription factors [BR:
sphd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HY78_29505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_29
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ARR57651
LinkDB
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Position
pDC03:complement(3162..4079)
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AA seq
305 aa
AA seq
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MGGGMELYQLRYFIAVAEEQNVSAAARVLNVSQPPVTRAIQALERVVGHALFVRSTKGVS
LTPAGSEFLKEARETLAQAQRTIDRSSAAGRGERGQLRIGYFGTNIFGYLPSVIDAFRKA
VPDVEVTLHTMSKFEQVDALRSNRLDVGIARYYPIEPDMAVETVGYESLLAALPASFPLG
NAKEITPQALCASPLVLSQSGGRPSYADEIIRLLGNAGVTPKISQITDNIIAVMGLVASG
IGVSIVPSSIAALKWPQVQFQSIKGAHTKVPIAMIYVRDSPRPATSAFVNFCLSEAGDVE
AVSRS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgggatggagctttatcaacttcgctatttcattgcggtagcagaggagcag
aacgtgagtgcggcagcgcgcgtgcttaacgtctcgcaaccgccggtcacgcgtgcgatc
caagccttggaaagggtggtcggtcacgcactgttcgttcgcagtacgaaaggcgtcagc
ctgaccccagcaggatccgagtttctgaaagaggcgcgagagacattggcacaagctcaa
aggacaatcgaccgcagcagcgctgccgggcgaggggagcggggtcagctgcgcatcggc
tatttcggcaccaatatctttggttacctgccgagcgtgatcgatgcgtttcgaaaggct
gtgcccgacgtcgaggtgactttgcacaccatgagcaagttcgagcaggtcgacgctttg
cgcagcaaccgattggacgtcgggatcgcgcgatattatccaattgaaccggacatggct
gtcgagacggttggttacgagagtttgctagccgcgctgcctgcctcctttccgttaggc
aatgcgaaggaaataacaccacaagccttatgcgcatcgccacttgttctttctcagtcc
ggcggcaggccgagctatgcggacgaaataattcgattgcttgggaacgccggcgtcact
ccgaagatatctcagataaccgacaatatcatagcggtcatggggctagtggcgagcggc
atcggcgtttctatcgtgccgagctcgatcgcggccctaaaatggccgcaagttcaattc
cagtcgatcaagggcgcgcacaccaaagtcccgatcgcgatgatctatgtgcgcgattct
ccaaggcccgcgacgagcgcgttcgtgaacttttgcctgtcggaggcgggtgatgtcgag
gcggtcagtcgtagctga
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