KEGG   Rhizorhabdus wittichii DC-6: HY78_29780
Entry
HY78_29780        CDS       T05200                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HY78_29780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_29780
Enzymes [BR:sphd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HY78_29780
Secretion system [BR:sphd02044]
 Type IV secretion system
  Trb secretion system protein
   HY78_29780
SSDB
Motif
Pfam: T2SSE AAA_16 ABC_tran ResIII FtsK_SpoIIIE AAA_29 nSTAND3 DEAD Sigma54_activat AAA_19 AAA_30 AAA_7 Zeta_toxin AAA_23 Mg_chelatase AAA_22 TrwB_AAD_bind CbiA Sigma54_activ_2 NB-ARC IstB_IS21 NACHT AAA_10 AAA_28 DUF87 Pox_A32 AAA_33 ATPase GTP_EFTU SRP54 AIG1 AAA MMR_HSR1 TsaE AAA_24 G-alpha
Other DBs
NCBI-ProteinID: ARR57690
LinkDB
Position
pDC03:53831..54787
AA seq 318 aa
MVQHNPLTLDRKAHALRQSLGPVIASALAEKLVVEVMVNPDGKIWVDRIGAGREYSGHDM
TPADAERILRLLADHAGEVVTRDRPRVSATLPETGERFQGIFPPVAANAMFSIRKRPEVI
FTIDDYISEGIMSAAQAALLSEAAEQRANMLIVGGTGSGKTTLANAILALPAFAEDRVFL
IEDTAELQCAATDKVELLTKRSDPPVTMTDLVRDSLRLRPDRIIIGEVRDGSALDLLKAW
NTGHPGGLATIHANSAYEGLTRLEDLIGEVTQRIPYRAIAQAINVLVFIRRTKEGRQIEN
IARVAGRDGDRYTIEDIN
NT seq 957 nt   +upstreamnt  +downstreamnt
atggttcagcacaacccgcttacgcttgaccgcaaggcccatgcgctgcgtcagtccctt
ggccccgtcatcgcgtctgcgcttgccgaaaagctggttgtagaggtcatggtgaaccct
gacggcaagatatgggtcgatcgcatcggcgcgggccgcgagtatagcggccacgacatg
acgccggcagatgccgaacgcatcttgcggctactggcggaccatgccggggaagtcgtg
acgcgcgatcggccgcgcgtcagcgccaccttgcccgaaaccggcgagcggtttcagggc
atattcccgcctgtcgcggcgaatgccatgttttcgatccgcaagcggcccgaggtcatt
ttcacgatcgacgactatatctcggaaggcatcatgagcgccgcccaggcggcgctattg
agcgaagcggccgagcagcgggcgaatatgctgatcgtcggcggcaccgggtccggcaag
accacgctcgccaatgcgatccttgcgcttcccgccttcgccgaggaccgcgttttcctg
atcgaggataccgccgagctgcaatgcgcggccactgacaaggtggagctgttgaccaag
cgcagcgacccgcccgtcacgatgaccgatcttgtccgggacagcctgcggttgcgtccg
gatcggatcattatcggcgaggtccgcgacggctccgcgctggacttgctcaaagcgtgg
aacaccggccatcccggaggactggcgacgatccacgcaaatagcgcctatgaaggtttg
acccgtcttgaagacctcattggcgaggtgacgcagcgcatcccgtatcgagcaatcgcg
caggcgatcaacgtcctcgttttcatcaggcggaccaaggaaggacgccagatcgagaac
atcgcccgcgtcgccggtcgcgatggcgaccgttatactattgaggatattaactaa

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