Sphingobacterium zhuxiongii: GFH32_00175
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Entry
GFH32_00175 CDS
T06292
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GFH32_00175 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_00175 (recO)
DNA repair and recombination proteins [BR:
sphe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GFH32_00175 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GFH32_00175 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF4441
Motif
Other DBs
NCBI-ProteinID:
QGA24838
UniProt:
A0A5Q0QB00
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All DBs
Position
complement(28954..29670)
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AA seq
238 aa
AA seq
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MLHQTKGITLKITNYSESSVVAQIYTEAFGLQSYLINGARKPKAKISTNMLQPFHLLELV
VYNKENNNLQRIKEAQHSPVLKHVPLDIVKSSIALFLNEILYKVLRHQATDKHLFEFLEN
AIMWLDESEVGLANYHLIFLLKLTHYLGFKPSFNDQPYFDLIEGRFVSILPPHVYTLQEP
YTSILRELANSSFSNCNKTRLKREDRSYLLQKLVDYYRLHTENFGELNSLYVLEEIFD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcaaactaagggcattaccctaaagattacaaactattccgaaagtagcgtt
gtcgcgcagatctataccgaggcattcggtttacaatcctatttgatcaatggtgcgaga
aaaccgaaggcaaaaatatccactaacatgttgcaacctttccatttattggaactcgtg
gtctacaacaaagaaaacaacaatcttcagcgcattaaagaagcacaacatagtccagta
ctgaagcatgtacccttagatatcgtaaaaagttcaattgcactttttttaaacgaaatt
ctctacaaagtgctacgtcatcaagccactgacaaacatcttttcgaatttttagagaat
gctattatgtggttagatgaatctgaggtaggattagcaaattatcacctcatttttcta
cttaaacttacccattatttaggatttaaaccctcgttcaacgatcaaccctatttcgac
cttattgaaggtcgctttgtcagcatattgcctccacatgtatatacacttcaagaacct
tacacctcgatcttgagagaattagcgaattcctcctttagcaattgtaacaaaacgcga
ttaaaaagagaggatagaagctatcttttacaaaagcttgtggactattatcgtcttcat
actgaaaactttggcgaactaaattcgctctatgtattggaagaaatattcgattaa
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