Sphingobacterium zhuxiongii: GFH32_00425
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Entry
GFH32_00425 CDS
T06292
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphe
Sphingobacterium zhuxiongii
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphe03032
]
GFH32_00425
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_00425
Enzymes [BR:
sphe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GFH32_00425
DNA replication proteins [BR:
sphe03032
]
Prokaryotic type
DNA Topoisomerases
GFH32_00425
DNA repair and recombination proteins [BR:
sphe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GFH32_00425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QGA24883
UniProt:
A0A5Q0Q5Y9
LinkDB
All DBs
Position
complement(81910..82971)
Genome browser
AA seq
353 aa
AA seq
DB search
MPTSENLIADSEALHEAGLRYVSCQGRGYQRVRQGKHFKYLDQQGKPIQNPQTLARIQAL
VIPPAWEQVWICATSNGHIQSTGIDVRGRKQYLYHPAWSQLRKKDKFGSLYIFGQRMSRL
QKHITSDLTSRQLSKERICALALAVMSKTYFRVGNTAYEKENKSYGLTTLRNRHVQISTN
KVFFKFIGKKGIRQQSYLTEKSLVRLLAKVKEIPGQRLFQYYDHDGQPTPLDSGTLNAYL
KAATDADITCKTFRTWYGCILALHYLGQSALPTSATARKQQLVTVIDQVAQQLGNTRSIT
RSHYIHPYIQKSYLDGALDNWIKRVSLNPERSPTDAAYKKKLMQLIRSAGYSG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcccacatcagaaaatttaatagcagattccgaagccttgcatgaagcagggcttcgt
tatgtttcgtgccaagggcggggctatcagcgtgtacgtcagggaaaacactttaaatac
ctcgatcagcaaggcaagcctattcaaaatccacagacgcttgcccgtattcaggctttg
gtgatccctcctgcttgggaacaggtttggatctgtgctacgagcaacggtcacatccaa
tctaccggaatagatgtgcgcggcagaaagcagtacctctatcatccggcatggagccag
ctacgtaaaaaggataaatttggttcactttatatattcggtcagcgaatgtcccgttta
caaaaacatatcacgtccgatcttacttcgcgccagctatccaaagaacgtatttgtgct
ttagcgctggccgtgatgagcaagacctacttcagagtcggcaatacggcttacgaaaag
gagaataagtcctatggccttaccaccctgcgcaatcgccatgtacagatcagcacaaac
aaagtattttttaaatttataggtaaaaaaggtatccgccaacaaagctatcttacggaa
aaatcgctggtgcgtttgcttgctaaggtaaaggaaatccctggacaacgtctttttcaa
tactatgatcatgatggtcaacccacaccattagattccggaacgctaaatgcctatctt
aaagcagccaccgatgccgacatcacctgcaagaccttccgtacttggtacggctgtatc
cttgcactccactaccttggccaatccgcacttcctacgagtgccactgcacgcaaacag
caactcgtgaccgttatcgatcaggtagcacagcaattgggaaataccagatccattacc
cgtagtcattatatacatccctatatacagaaaagctaccttgatggagcattggacaac
tggataaaacgggtgtccctgaatcctgaacgctcccctacagacgctgcatacaaaaag
aaactgatgcaattgatccgatctgcgggttatagcggatag
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