Sphingobacterium sp. dk4302: GFH32_04295
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Entry
GFH32_04295 CDS
T06292
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sphe
Sphingobacterium sp. dk4302
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphe02000
]
GFH32_04295
Transporters [BR:
sphe02000
]
Other transporters
Pores ion channels [TC:
1
]
GFH32_04295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
CarbopepD_reg_2
CarboxypepD_reg
FERM_C
Motif
Other DBs
NCBI-ProteinID:
QGA25584
UniProt:
A0A5Q0Q8J7
LinkDB
All DBs
Position
complement(983594..986737)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKRLRLIIQATGKLLLLFLISIGFANAQINNAPIVNANTSGIVIDAKTKAPLEGVTIQLE
GVTHSVQTDRKGQFQLVTGQKPPLNVVVSFLGYQSKTISIDKSPFQIELEPLIENLDEVV
VVGYGTQRKRDLTGASSNLNLSKDIAGRAASEIGQALYGQMSGVQVTAGSGKPGASTSIQ
VRGINSISAGTAPLIVVDGIPAPNYDLNLINNADIESIQVLKDAASSAIYGSRAANGVIL
IKTKAGKAGSSKFEVNYVSSLQEVIDKVDVMNASEYAQASIEAAQNSWVDKGGDPNAPNT
IAARGSYKYTWPTALEHPELLPNTNFQDAIYRVAPSNKVDIAASGGGEHSNYRVSGSILK
RKGIALFSDYDKYNLGFNTSTKILDRLEIGGASNLSYDQEQEPFNRMFEWAVQYPSIYPL
YSENGYLGAPLNQAGFENYNAILFRPQNGHPLYRSTDEIKSSRFNALGNIYGQLELLKGL
SFKSAFNYFYNRNDGSNYQAKDHLLGPTYFTEGAMAKTLTQTISYTFQNLLNYDKTWGKH
SLQALLGTEYNYANYSFNYLERRGYDNDLVKALSAGKTVFAADDRASKTSFISYFARANY
AFSGKYLLSASLRRDGSSRFASNKKWGNFPAVSVGWIISEEDFLDEANWLSNLKIRASYG
LTGNDKFADYKWIGQITQGRAAIGNTLLTTYYPSSITNPNLQWEKTKQVNLGLDIGFLHE
RFQVTIDAYKSKSDGLLLEVPTPVVSGFTTIFKNIGAVENKGLEIALNSQNIQKESFKWS
SNFNISFNRNKILALGENSTPMVLSGSVFSGMQKINQIGKPVFSFYGYQYDGVYLNQAAI
DADPAHYAGAKPGDGRYKDVDGNGQLNENDRTIIGNPNPDFIWGFTNRFSYKNIELSIVL
QGVQGGELMDDNVHRSLLYHEGRNYLKELNNRWRSEENPGDGYHYKIKVDENGYEKTPSS
YFLFSKSYWRLKDLTVAYTLPSRLSEKILAKSLRVYFNGNNLFTRKDAPVSDPEGFSGNA
DDASRQGISSNTYPTAKIYSLGLNIAF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacttaggctgattattcaggctaccgggaagctattgcttttatttttaata
agcataggctttgcaaatgcacaaataaacaacgcacctattgtaaatgctaacacatcg
gggatcgttatcgacgcaaaaactaaagctccattagaaggcgttactatccagctagaa
ggcgttacacatagcgtacaaaccgatagaaaaggacaatttcaattagtaacaggacaa
aagccacctttaaatgtcgttgtttcttttcttggctatcaatctaaaacaattagtatt
gataaatctccttttcaaatagagttagaaccacttatagagaatctagatgaggttgtt
gttgtcggttatggaacgcagcgtaaaagagacttaacaggcgcatctagcaatctaaac
cttagtaaagacattgctggacgtgcagcatcagaaattggtcaagcgctctatgggcaa
atgtcaggtgtacaagtcacagctggatctggaaaacctggcgcctcaaccagcattcag
gtacgaggtatcaactctatttcagctggcacggcaccacttattgttgtcgatggaatc
cctgccccaaattacgacctcaacttaatcaacaatgcagatatcgaatcaatacaggta
ttgaaagacgcggcatcatcagccatctacggatctcgagctgcgaatggcgtcatccta
atcaagacgaaagcgggcaaagcaggatccagcaaatttgaagttaattatgttagctca
cttcaagaagtcattgacaaagtcgatgtaatgaatgcgagtgaatatgcgcaagcatct
attgaagcagcgcagaacagctgggtcgataagggcggtgatcccaatgctccaaataca
attgcagcgcgcggaagttataaatatacttggccaacagcattagagcatccagagtta
ctacctaataccaattttcaagatgccatataccgcgtagccccatctaacaaagttgac
atcgcagcaagcggtggtggtgagcacagtaactacagagtatctggtagcattttaaaa
agaaaagggattgccttattctcggattacgataaatacaacttaggatttaatacctct
acgaaaatactagatcgactcgaaatcggtggagcaagcaatttaagttacgatcaagaa
caggaaccctttaatcgtatgttcgaatgggcagtacagtaccctagcatttatcccttg
tatagcgaaaatggatatttaggagccccattgaatcaagcaggatttgaaaactataat
gccattttgtttcgaccacagaatgggcacccactctaccgcagcaccgatgagatcaaa
agtagtcgattcaatgctcttggaaacatctatggacagttggaattattaaaaggtcta
agcttcaaatcggcattcaattatttctacaatagaaatgacggtagtaactaccaagcg
aaagaccacttgttaggccccacatatttcactgaaggcgctatggcaaaaacgctaaca
caaaccataagctacacctttcaaaatttattgaactatgataagacatggggaaaacat
agcttacaagcccttttagggacggaatacaactatgcaaattatagcttcaattacctc
gaacgtcgaggatatgacaatgacttagtaaaagcactgagtgctggaaagactgtattt
gcagcagatgatagagcatcgaaaacatcatttatatcttattttgcacgagcaaactat
gccttttctggaaagtatcttttatctgcgagtttacgtcgcgatggctcttcacgattc
gcctccaataagaaatggggaaatttccctgcggtatctgtaggttggattatctcagag
gaagattttctggatgaagcaaactggcttagtaatttgaaaatccgcgcaagttatgga
ttgacaggaaacgataaatttgccgactataaatggataggtcagattacacagggtcga
gcagcaataggtaatactcttctaacgacctattatccttccagtattacaaatcccaat
ctacaatgggagaaaaccaaacaagtaaatctagggctagatatcggcttcttacatgag
cgttttcaagtaaccattgatgcatacaaatcgaaatcagatggcctactcctcgaagtt
ccaacaccagttgtatccggctttactacgatattcaagaatattggtgcagtcgagaac
aaaggattggagatcgctttaaacagtcaaaacatacagaaagaatcttttaaatggagt
tctaattttaacatctcttttaatagaaacaaaattcttgcccttggtgagaacagcaca
cctatggtattgagtggctctgtatttagtggcatgcagaaaatcaaccaaataggcaaa
cctgtatttagcttttacggctaccaatacgatggcgtgtatttgaatcaggcagcaatc
gatgcagatccagctcactatgcaggcgcaaaacctggcgatgggcgatacaaagacgtc
gatgggaatggtcagctcaatgagaacgatcgaacgatcatcggtaatccaaatccggat
ttcatatggggatttacaaaccgcttctcctataagaatatagagcttagtatagtccta
cagggcgtacaaggcggggaattaatggatgacaatgttcatcgatccttactttatcat
gaaggtcgcaattatttaaaagaactgaataatcgatggagatctgaggaaaatccagga
gatggataccattacaagatcaaagtagacgagaatggatacgaaaaaacgccatcgagc
tactttctattctctaaatcttattggcgtctaaaggatctgacggttgcttatacactt
ccaagtagactctccgaaaaaatattagcaaaatcattacgtgtctattttaacggaaac
aacctatttacacgaaaagacgcaccagtttctgatcctgaaggtttctctggaaatgca
gatgacgcaagtcgtcaagggataagttcaaacacctaccctacggcaaaaatatattct
ctaggactcaatattgcattttaa
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