Sphingobacterium zhuxiongii: GFH32_04815
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Entry
GFH32_04815 CDS
T06292
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe03420
Nucleotide excision repair
sphe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GFH32_04815
03430 Mismatch repair
GFH32_04815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_04815
Enzymes [BR:
sphe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH32_04815
DNA repair and recombination proteins [BR:
sphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFH32_04815
MMR (mismatch excision repair)
Other MMR factors
GFH32_04815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
ResIII
AAA_11
DEAD
YecM
AAA_22
ERF
Motif
Other DBs
NCBI-ProteinID:
QGA25682
UniProt:
A0A5Q0QDS4
LinkDB
All DBs
Position
1113862..1116150
Genome browser
AA seq
762 aa
AA seq
DB search
MDFLAGLNPSQRAAVEQTEGPVMIVAGAGSGKTRVITYRVAHLIRKGVDPFNILVLTFTN
KAAKEMRERIMKVVGSEAKNIWMGTFHSVFARILRVEAELIGYPRNFTIYDTDDTKSLLR
SILKEMNLDDKLYNVNHVYGRISSAKNNLISPQEYNKNEAIMAEDVANGRGQLGQIYMTY
AQRCYRAGAMDFDDLLFKTNVLLNKYPDVLHKYQHQFKYLMVDEYQDTNFSQYLIVKRLA
AVNENICVVGDDAQSIYAFRGANIQNILNFQKDYPDVKVFKLEQNYRSTQMIVNAANSII
ANNKNQLEKNVFSDNEEGEKIKVTRAFSDNEEGKIVAENISQEKALKGLKYKDFSILYRT
NAQSRSLEEALRKLGIPYKLYGGTSFYQRKEIKDLIAYFRLTFNPNDEEALKRVINYPRR
GIGDTTVERIMVMADQQQIRLWDVVANAQMFLDGRSAGSVGNFGLMIQSFQALSKTNSAF
ETAMHIAQHSGILKELYEDKSVEGLSRYENIQELLNGIKEFSEREDLEEKGLDIFMQDIA
LLTNDDNDKDPNADTVSLMTIHASKGLEFPVVFIVGLEENLFPSQLSLNSRTELEEERRL
FYVAVTRAEKKLFLSYATSRYRWGTLNNCEPSRFLDELNPACLDLDFKPRSGGSGGTDDF
SSERVTWQRKEANTTGDVFSKPKPKVIKTTSILPKAHVPTAGFAPSDTSRLQVGMEVEHE
RFGFGKVINLEGNKPDIKATIFFKELGQKQLLLKFAKLRIIE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
ttggattttttagcaggattaaatccctcacagcgggctgccgtagaacaaacagaagga
ccagtaatgattgttgctggtgcaggatcagggaaaacacgtgtaattacttatagagtt
gcgcaccttattcgaaaaggtgtagaccctttcaatatattggtgctgacatttacgaat
aaggcggcaaaagagatgcgcgagcgtatcatgaaggtcgtaggttcagaagcaaagaat
atttggatgggaacttttcactcggtcttcgcgcgcattcttcgcgtggaagctgagtta
ataggatatccgcgcaattttacgatttatgatactgacgatacaaaaagtttattgcgt
tctattctaaaagaaatgaacttggacgataagctttataacgttaatcatgtgtatgga
cggatttcttcggcgaagaataatttgatatcgccccaggaatacaataagaatgaagcc
atcatggcagaggatgtcgctaatggccgaggtcaactaggacaaatctatatgacttat
gcacagcgctgttatcgtgctggagcgatggatttcgatgatttgttattcaagacaaat
gttttgttaaacaagtatccggatgttttgcataaatatcaacaccagtttaagtatctg
atggttgatgagtatcaggataccaacttctctcaatatcttattgtgaagcgtttagca
gctgttaatgaaaacatatgtgtggtaggtgatgacgcgcagagtatctatgctttccgc
ggtgcaaacattcagaatatcttgaactttcaaaaggattatccggatgttaaagtcttc
aagttggagcaaaattatcgctcgacacagatgatcgttaatgcggcgaacagtattatt
gcaaataataaaaatcaattagagaaaaatgtcttttcagataatgaagagggtgagaaa
attaaagtaacgcgcgctttctcagataacgaagaaggtaagattgttgctgaaaatatt
tcacaagagaaggctctaaaaggattaaaatataaagatttttccattctttaccgtaca
aatgcacaatcgagatcgctcgaagaagcattacgtaaattaggaattccatataaactt
tacggaggtacgtcattctatcaacgtaaagaaatcaaagatttaattgcttacttccga
ttaacgtttaatcccaatgatgaggaagcgttgaagcgagtaattaattatccgagaaga
ggcattggcgacaccaccgttgagcgtattatggtgatggctgatcagcaacaaattcga
ctttgggatgttgtcgcaaatgcgcagatgtttctagatggacgcagtgcaggttctgtt
ggtaatttcggcctgatgatacaaagctttcaagccttatctaagacgaattcggcattt
gaaacagcaatgcatattgctcaacattcaggcattttaaaagaattgtatgaggataaa
tccgtcgaagggctaagtcgttacgagaatattcaagaactcttgaacggtatcaaagag
ttttcagaacgtgaagatttagaagaaaaaggattggatatctttatgcaggatatcgca
ctgctgacgaatgatgataacgataaggaccctaatgcggatacagtatctttaatgaca
atacatgcttcaaaaggattggagttccccgttgtatttattgttggtttggaagaaaat
ctatttccgtcgcaattgtctttaaattcgcgtactgaattagaggaagaacgtcgatta
ttctatgttgctgttacacgagcagagaaaaagctatttctttcttacgcaacttcgcgt
tatcgatggggtacattgaacaattgtgaacctagtcgtttcttagacgagttgaatcca
gcatgtttagatcttgactttaaaccgagatccggtggcagtggaggaacagatgacttc
tcgtctgaaagagttacatggcaacgcaaggaagcaaatactactggcgatgttttctct
aagcctaaacctaaggtgatcaaaacgacgtcgattcttccgaaagcacacgtgccgaca
gcagggtttgcgccttcagatacctcacgtttacaagtagggatggaagtggagcatgaa
cgtttcggatttgggaaagttatcaacctcgaagggaataaacccgacataaaagcaact
atttttttcaaagagttgggacagaagcaattgttgcttaaatttgccaaacttagaata
atagaataa
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integrated database retrieval system
