KEGG   Sphingobacterium zhuxiongii: GFH32_06680
Entry
GFH32_06680       CDS       T06292                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sphe  Sphingobacterium zhuxiongii
Pathway
sphe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sphe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GFH32_06680 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphe03019]
    GFH32_06680 (rny)
Messenger RNA biogenesis [BR:sphe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GFH32_06680 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 DUF4407 UPF0154 PFF1_TM
Other DBs
NCBI-ProteinID: QGA26020
UniProt: A0A5Q0QFN8
LinkDB
Position
1552305..1553864
AA seq 519 aa
MELSTTISIIISLVVGVFIGRYLLQMLFKKQEQSANDKAAQIIKDAEQQGEHSKKQRQLE
AKEKFLQLKAEHEKEVNQRNNAISQKENTVRQKEQSMNQKLENLNREKQELDGKSKKLEQ
LVELNEKKKEEVELLKGQHIKQLESIAGLSADEAKEQLVNSLREEARSQAIIQIKDIVDE
AKLTASKEAKKVVIQTIQRTATEAAIENTVSIFNIENDEIKGRIIGREGRNIRALEAATG
VEIIVDDTPEAIILSGFDPVRREIARLSLHRLVTDGRIHPARIEEVVAKTRTQIEDEIVE
IGERTVIDLGIHGLHPELIRMVGRMRYRSSYGQNLLQHSREVANFAATMASELGLNVKHA
KRAGLLHDIGKVPDDNPELPHAILGMQLAEKYKEHPDVCNAIGAHHDEIEMTSMISPIVQ
ACDAISGARPGARREVVESYIKRLKELEDLALSYPGVEKTFAIQAGRELRVVVESEKVSD
AQAEILAADISNRIQTEMTYPGQIKVTVIRETRSVSYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggagttatcaactactatatcaataataatatcacttgttgtaggtgtgtttattgga
cgatatttgttgcagatgcttttcaaaaagcaggagcaatccgctaatgataaggctgca
caaattatcaaagatgcagaacaacaaggtgaacatagcaaaaagcaacgtcaattagag
gcaaaagaaaagtttttacagttgaaggccgaacatgaaaaagaggtaaatcaacgtaat
aatgccatttcacaaaaagagaatacagttcgtcagaaggaacaatccatgaaccaaaaa
ctggagaacttaaatcgtgagaagcaggaattggatggcaaatctaagaaattagagcag
ttagtggagctgaatgagaaaaagaaagaagaagtagaactgttaaaaggtcagcatatc
aagcaattggaaagtattgcaggcttgtcagctgatgaagcgaaagaacaattagtaaac
tcattacgtgaggaagcacgttctcaagcaataattcaaattaaagacatcgttgatgag
gcaaagttaactgcatcaaaagaagcgaagaaagttgtaatccaaacgattcaacgtaca
gcaactgaggcagcgatagaaaacacagtttcaatatttaatattgagaatgatgagatt
aaaggacgtattatcggtcgtgaaggtcgtaatattcgtgcgttagaagcagctacggga
gttgaaattattgttgatgatacgcctgaagcgatcatcttatctggttttgatcctgtt
cgtcgtgaaattgcacgtttatctcttcacagattggtgacggatggtcgtatccaccct
gctcgtattgaagaggtggtagcgaagacgcgtacgcagattgaagatgagattgttgag
attggagagcgtacagtaattgacttaggtatccatggcttacatcctgaattgattcgt
atggttggtagaatgcgttatcgttcgtcatacggtcaaaaccttttacagcactctcgt
gaggtggcaaacttcgcagcgacaatggcttctgaattaggcttaaatgttaaacatgcg
aagcgtgcaggtcttttacatgatattggtaaagtacccgatgataatccagaattacct
cacgctatccttggtatgcaattagctgagaaatataaggagcatccagatgtgtgtaat
gcgatcggagcgcatcacgatgagatcgaaatgacttctatgatttcacctattgttcaa
gcatgtgacgcgatctctggggctcgtcctggagctcgtcgtgaagtggtagagagctat
atcaaacgcctgaaagaattggaagatttggcgctttcgtaccctggtgtagagaagaca
tttgcaatccaagctggacgtgaactacgtgtggttgtagaaagtgaaaaagtttctgat
gcgcaagcggaaatcttagctgcagatatttcgaatagaattcaaacagagatgacttat
ccaggtcagattaaagttactgtaattcgtgagacacgttctgtgtcttatgcgaaatag

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