Sphingobacterium sp. dk4302: GFH32_08710
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Entry
GFH32_08710 CDS
T06292
Name
(GenBank) hypothetical protein
KO
K03555
DNA mismatch repair protein MutS
Organism
sphe
Sphingobacterium sp. dk4302
Pathway
sphe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GFH32_08710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_08710
DNA repair and recombination proteins [BR:
sphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GFH32_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_14
AAA_21
AAA_23
DUF3730
AAA_29
Rad17
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QGA26402
UniProt:
A0A5Q0QFQ3
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Position
2042635..2043969
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AA seq
444 aa
AA seq
DB search
MAATFLIDEQTLKDIQLRDFRGRTIFDFFDQAITEGGQDYFRDVFYTPLLNIEGIKARQT
KIRRLEPVADVEFPFYRVIIKDLEKYIHASHSGASQGLSFLDFLGVRSPIYYYRKRSILE
ASEFLISSMKFYKEVNKHHPYEDMAEMIDLTQDCLSQLYKGKVFNTDKLKVNIFNIDSLD
RLIRYELAAKLKKLICFFFEVDAYLAVAKISKSLGFCYPEVFPKNETGEIRMEGVYHIFH
KAPVKNDVTLSNNKKIWFLTGANMAGKSSIIKTISSALYLTHIGFPVPADEIKTDLIDGV
FTSINLQDNLELGYSHFYVEAIRLKEIVDQLPVDSNALIILDELFKGTNHSDASHAILDV
MRNLAQVDGPYVIVSSHITELSQQLKDIPNIDFMRMKIEADENGLPVFTYKIAQGIAEEK
LGMWLLKQSGVFTSIDRLKGGSAK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacctttctaatcgatgaacaaaccttaaaagatattcagctaagagacttt
agggggcgaacaatttttgatttttttgaccaagcaattactgaaggcggacaggattac
tttcgtgatgttttttatactcctttattaaatattgagggaatcaaagcacgccaaacg
aaaatccgtaggctcgaacctgttgctgatgttgaatttcctttttatcgggttatcatt
aaggatttagagaagtatatccatgcttcgcactctggagcaagtcaaggccttagtttt
ttagacttcttaggtgtacggtcgccaatttattattaccggaagcgatcaattctagaa
gcgtcggaattcttaatttcctccatgaaattctataaggaagtcaataaacatcatcca
tatgaagatatggctgaaatgattgatttaacgcaagattgcctgagtcagctttataag
gggaaagtattcaataccgataaattaaaagtcaacatcttcaatatcgattcgctggat
cgactaatacgctatgaacttgcggctaaactcaagaaattaatctgtttcttttttgag
gttgatgcctaccttgccgtggcgaagatctccaaaagtctaggcttctgctatccagaa
gtatttccgaagaatgaaaccggtgagatcagaatggaaggcgtttaccatatttttcat
aaggcgcctgtcaaaaacgatgtgaccttaagtaataataagaagatttggtttcttacc
ggtgcaaatatggctgggaagtcttcgattattaagaccatatcttccgcgttgtattta
acccatattggctttcctgtgcctgccgacgagattaagaccgacctaatcgatggtgta
tttaccagtatcaacttacaagataatctggagctcggctatagccacttttacgtggag
gctattcgattaaaagaaatcgttgatcaactgcctgtagattcgaatgccttaattatc
ctcgacgaattattcaaaggaactaatcatagcgatgcatcacatgctattctcgatgtt
atgcgtaatctagcacaagtggatggaccttatgttattgtttcttctcatattactgag
ctgtctcaacaattaaaagatattcctaacatcgattttatgcgcatgaaaatcgaagcc
gatgaaaatgggttgccagtttttacgtacaagattgcacagggaattgcagaagagaag
ctaggtatgtggttactaaaacagagtggtgtttttacttcgatcgatcgattaaaggga
ggttcggcaaaatag
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